Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed2g2303 ATGGATGTTAAGGTGAAGAAAACACAGTCCACAGATCAAGAAGATCAAGAGGTGCAGGACTGTGAAGAAGAAGACATCAGAAAAGGTTCATGGAGCGTTGAAGAGGACACCATTCTCCAAAATTACGTGGCCACCCACGGCGATGGTCGTTGGAATTCCCTCGCACGCTCTGCAGGCACGTACTAA 186 0.4839 MDVKVKKTQSTDQEDQEVQDCEEEDIRKGSWSVEEDTILQNYVATHGDGRWNSLARSAGTY 61
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed2g2303 61 ProSiteProfiles Myb-like domain profile. 23 61 IPR001005 -
Aed2g2303 61 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 23 61 IPR017930 -
Aed2g2303 61 PANTHER MYB TRANSCRIPTION FACTOR 4 59 - -
Aed2g2303 61 Gene3D - 25 60 - -
Aed2g2303 61 PANTHER MYB TRANSCRIPTION FACTOR-RELATED-RELATED 4 59 IPR044676 GO:0003700|GO:0006355|GO:0043565
Aed2g2303 61 SUPERFAMILY Homeodomain-like 24 58 IPR009057 -
Aed2g2303 61 MobiDBLite consensus disorder prediction 1 27 - -
Aed2g2303 61 CDD SANT 30 60 IPR001005 -
Aed2g2303 61 Pfam Myb-like DNA-binding domain 28 59 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed2g2303 Aed-Chr2 26417922 26418107 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed2g2303 22 58 MYB Transcription Factor Family AT5G49620 67.568 2.99e-13 60.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Aed2g2303 Myb_DNA-binding 5.6e-07 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed2g2303 K09422 - gmx:100797220 94.7449