Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed2g2290 ATGGAGAGTCATAATAATATGATGATGATGATGATGGGTGTTAAGAAAGAAGAATATGCTGCTGCAGTAGGATCTTCGTCCTTCCCTTTTAATAATCATCCATTCTTTGATTTCTCTGAAGATAAGGGCTCTTTAGGGTTTATGGAGTTATTGGGTGTGCAAGACTATAGCCCTCTCGTTGATTTGCCTCTTTCGTCGACACACGTGTCTCACTCTCACACCTCTGCTGCTGTTAAGGAACCACCACCACCTGAGACTTTTAAGAAAGAGTGTTCCGAGGTAACCAACCAACAACAACCTGCGACTCCCAACTCTTCTTCCATTTCCTCCGCCTCCAGTGAGGCTCTCAATGATGAACAGAATAAAACTGTAAACCAAAAGACCAAGGAACAGTTGAAGGCTAAGAAGACAAATCAGAAGAGACAGAGAGAAGCGAGATTCGCGTTCATGACGAAAAGCGAGGTGGATCATCTGGAAGATGGGTACAGATGGAGAAAGTACGGTCAAAAAGCTGTGAAAAACAGCCCCTTTCCCAGGAATGCTGCCACTTTTCCTCAAGATCAGACTTCGTTGTTAAGTGACTATGGCCTTCTTCAAGATGTTGTTCCTTCCCATATGTTGAAAGAAGACTAG 633 0.436 MESHNNMMMMMMGVKKEEYAAAVGSSSFPFNNHPFFDFSEDKGSLGFMELLGVQDYSPLVDLPLSSTHVSHSHTSAAVKEPPPPETFKKECSEVTNQQQPATPNSSSISSASSEALNDEQNKTVNQKTKEQLKAKKTNQKRQREARFAFMTKSEVDHLEDGYRWRKYGQKAVKNSPFPRNAATFPQDQTSLLSDYGLLQDVVPSHMLKED 210
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed2g2290 210 Gene3D WRKY domain 145 190 IPR036576 GO:0003700|GO:0006355|GO:0043565
Aed2g2290 210 SUPERFAMILY WRKY DNA-binding domain 150 180 IPR036576 GO:0003700|GO:0006355|GO:0043565
Aed2g2290 210 MobiDBLite consensus disorder prediction 71 144 - -
Aed2g2290 210 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 1 180 IPR044810 GO:0003700
Aed2g2290 210 SMART WRKY_cls 158 197 IPR003657 GO:0003700|GO:0006355|GO:0043565
Aed2g2290 210 MobiDBLite consensus disorder prediction 90 122 - -
Aed2g2290 210 Pfam WRKY DNA -binding domain 159 180 IPR003657 GO:0003700|GO:0006355|GO:0043565
Aed2g2290 210 PANTHER WRKY TRANSCRIPTION FACTOR 1 180 - -
Aed2g2290 210 ProSiteProfiles WRKY domain profile. 153 180 IPR003657 GO:0003700|GO:0006355|GO:0043565
Aed2g2290 210 MobiDBLite consensus disorder prediction 123 144 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed2g2290 Aed-Chr2 26348760 26350112 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed2g2290 36 180 WRKY Transcription Factor Family AT2G47260 52.841 1.11e-36 129
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Aed2g2290 WRKY 1.4e-07 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed2g2290 - - gmx:100816452 244.202
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed2g2290 2 26348760 26350112 Aed2g2290 2 26348760 26350112 ECH
Aed2g2290 2 26348760 26350112 Aed8g0648 8 5620834 5625079 PCT