Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed2g2282 ATGGACAATAATATTACTAGTAGTGCCTCCCCCCAACTTGAGTCAGAGGCATCTTCAGAGCTCAAATCAGAAACTCAAACATCAAAGAAAAGGAAAATGGTCGAGAAAACAGTTGTGGCAGTGAAGATAGGAGAGAATGTTGGAAAGCTGAAGAACGAAGGACTACCTTCGGATTTTTGGTCTTGGAGGAAATATGGACAAAAACCAATCAAAGGGTCTCCATATCCAAGGGGGTATTACAAGTGCAGCACATCAAAAGGTTGTTCAGCCAAAAAGCAAGTAGAGAGATGCAGAACAGATGCTTCAATGCTCATAATCACATACACATCTACACATAACCATCCATGCCCCACTACTAATATCACCACAACAACAAAAGAATCTGAATCCGAAACCACCACCCAGGATCTCTCAGCAGCTACCTCAAAGGAGGAAGAACAAGAGCAAAGGGATAATAAGCCCAGTGATGAAGTTACAAATGAAGAAAAATTTCATTACTTGCAATCTCCAATACGTTGCTCACAAGACCAAGAAGAAGAACAAGAAGATCCTTTCAAACTAAACACGGAGAAAAGCCATGAAGATGACAGAATGGATCTTCTCTTAGAGGAAGACGAGCCCTTTTGTTATGGAGCACAACTCAAGAACTTGTCTGCTTCCAAAAATGAAGAACTTGACTTTTTCGATGAGCTTGAGGAGTTACCCATGTCTTCATCTTTCTTGCACTTTACGAGGAGCATTTTTTCCGATGAAAGGATTCCCGTTGCCCCTTCTTGA 777 0.4131 MDNNITSSASPQLESEASSELKSETQTSKKRKMVEKTVVAVKIGENVGKLKNEGLPSDFWSWRKYGQKPIKGSPYPRGYYKCSTSKGCSAKKQVERCRTDASMLIITYTSTHNHPCPTTNITTTTKESESETTTQDLSAATSKEEEQEQRDNKPSDEVTNEEKFHYLQSPIRCSQDQEEEQEDPFKLNTEKSHEDDRMDLLLEEDEPFCYGAQLKNLSASKNEELDFFDELEELPMSSSFLHFTRSIFSDERIPVAPS 258
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed2g2282 258 Gene3D WRKY domain 42 118 IPR036576 GO:0003700|GO:0006355|GO:0043565
Aed2g2282 258 ProSiteProfiles WRKY domain profile. 51 117 IPR003657 GO:0003700|GO:0006355|GO:0043565
Aed2g2282 258 SUPERFAMILY WRKY DNA-binding domain 54 117 IPR036576 GO:0003700|GO:0006355|GO:0043565
Aed2g2282 258 MobiDBLite consensus disorder prediction 141 163 - -
Aed2g2282 258 Pfam WRKY DNA -binding domain 58 115 IPR003657 GO:0003700|GO:0006355|GO:0043565
Aed2g2282 258 MobiDBLite consensus disorder prediction 111 194 - -
Aed2g2282 258 MobiDBLite consensus disorder prediction 175 194 - -
Aed2g2282 258 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 16 243 IPR044810 GO:0003700
Aed2g2282 258 PANTHER WRKY TRANSCRIPTION FACTOR 69-RELATED 16 243 - -
Aed2g2282 258 MobiDBLite consensus disorder prediction 111 140 - -
Aed2g2282 258 MobiDBLite consensus disorder prediction 1 32 - -
Aed2g2282 258 SMART WRKY_cls 56 116 IPR003657 GO:0003700|GO:0006355|GO:0043565
Aed2g2282 258 MobiDBLite consensus disorder prediction 1 22 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed2g2282 Aed-Chr2 26280764 26283231 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed2g2282 23 240 WRKY Transcription Factor Family AT4G01250 38.991 4.31e-38 133
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Aed2g2282 WRKY 4.2e-24 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed2g2282 - - gmx:100127368 372.859
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed2g2282 2 26280764 26283231 Aed2g2282 2 26280764 26283231 ECH