Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed2g2280 ATGGAAATTGATCATTTTTCTTCCACAGCTTTAAATTTCAAAGGAACCCAGGTGGGTTATAGTTCTACACTAGAGGATGTGTTCCAAGGGAAAGAGAGTTTCTCTGGGATGGAATTGCTGGGAGAGATTGATCCTCTCCCTTATGAGAATGGAAAAGGAGCCAAATTGTTCAAAGATCAAGATCAGAAACAGCTACAAAAACCCAAAGTTGACATCTTGATGTTGGAAGAGGTCAACTTTGACCCTGATATGCAACTGCAACCAACACAACTATTTCAGGAAACTACAGGACCAATGAAACATGCTGGGGTAAGTTCAGAACCAGTTGAATACAATAAGCAGGTGGCACCATCATTAACATCCTTAGAGCTCCTGAGAAATTACAGAAGCAGGTTCAAGAGGCTAAGCGAGCAAAACATAAACACCTTAAGCAATATTGAAACTTCTTTGGATCGCCAGAAGATGTCAACTGAAGAAATAATAAGAGTGGCTGGAGCAAGTTTTTACATCCCTATGCATCCATACGGATTGGATCTTGGTGGTTTGTCTGAGGAAGAAAATGGAGACATAGAACTTGCTCAATTTCTCCTTGCTGCAGCTGAGAGGGTAGGTTGCCAACAATTTGAACGTGCAAACAGGTTACTTCTCCATTGTGAGTGGAATTCATCTACCAGTGCAAGCCCTGCTCAAAGAGTTATCTTTCATTTCGCTCGAGCACTTCGAGAGAGAATATACAAAGAAACAGGAAGGATGACAGTAGTTCATGGATCAGAGAGAAATGAAGAAAGGGAGTTAATTCAGAAGATGGACACCAGCATTGCCCTTAAATGTCATCAAGAAATTCCTTTCAACCAAGTAATGCAATTCGCTGGGACACAAGCTATAGTTGAACATGTGGCATCTGAGACCAAAATCCATCTTATAGATCTTGAAATAAGAAGTGGAGTACAATGCACAGCTTTGATGCAAGCACTGGCAGAGCGCAAGGATTGCATAGTGCAACTTTTGAAGATAACTGCCATTGGACTCAATTCATTGAAAATCATGATAGAAGAGACTGGCAAAAGGTTAGGTAGTTTTGCTGAATCCTTGAACCTACCCTTTTCATATAAGGCAGTTTTTGTGACAGACATTGCAGAAATAAGTGAAGATCATTTTGAAATTGGAGAGGATGAAGCTGTGGCTGTTTACTCTCCATATATACTAAGGTCCATGGTATCAAGGCCTGATTGTATGGAAAACCTGATGAGGGTTATAAGAAACATCAAACCAGCTATAATGATAGTCCTTGAAGTAGAAGCAAACCACAACTCACCTTCATTTGTGAACCGCTTCATTGAAGCATTGTTCTTCTACTCAGCATATTTTGATTGCCTTGAAAGCTGCATAAGACATGAGATTGAGTGCAGAATGGCAGTGGAAGCAGTGTTATCTGAAGGGATAAGAGACATTGTTGCCATGGAAGGAAGGGAAAGGAGAGTTAGAAATGTAAGGATAGACGTTTGGAGAAAGTTCTTTGCAAGGTACCGAATGGTGGAAACCGGGTTTAGTGAGTCATCTCTGTACCATGCTCACTTGGTGGCTAAAGAGTTTGCTTTTGGGAAATTCTGCACTATAGAAAAGAATGGCAAGTGTCTTATAGTTGGATGGAAGGGGACCCCAATGCATTCAATCTCAGCTTGGAGGTTTCTTTGA 1695 0.4088 MEIDHFSSTALNFKGTQVGYSSTLEDVFQGKESFSGMELLGEIDPLPYENGKGAKLFKDQDQKQLQKPKVDILMLEEVNFDPDMQLQPTQLFQETTGPMKHAGVSSEPVEYNKQVAPSLTSLELLRNYRSRFKRLSEQNINTLSNIETSLDRQKMSTEEIIRVAGASFYIPMHPYGLDLGGLSEEENGDIELAQFLLAAAERVGCQQFERANRLLLHCEWNSSTSASPAQRVIFHFARALRERIYKETGRMTVVHGSERNEERELIQKMDTSIALKCHQEIPFNQVMQFAGTQAIVEHVASETKIHLIDLEIRSGVQCTALMQALAERKDCIVQLLKITAIGLNSLKIMIEETGKRLGSFAESLNLPFSYKAVFVTDIAEISEDHFEIGEDEAVAVYSPYILRSMVSRPDCMENLMRVIRNIKPAIMIVLEVEANHNSPSFVNRFIEALFFYSAYFDCLESCIRHEIECRMAVEAVLSEGIRDIVAMEGRERRVRNVRIDVWRKFFARYRMVETGFSESSLYHAHLVAKEFAFGKFCTIEKNGKCLIVGWKGTPMHSISAWRFL 564
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed2g2280 564 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 57 562 IPR005202 -
Aed2g2280 564 ProSiteProfiles GRAS family profile. 183 562 IPR005202 -
Aed2g2280 564 PANTHER GRAS FAMILY TRANSCRIPTION FACTOR 57 562 - -
Aed2g2280 564 Pfam GRAS domain family 193 562 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed2g2280 Aed-Chr2 26273858 26276017 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed2g2280 182 563 GRAS Transcription Factor Family AT1G66350 29.504 3.06e-51 182
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Aed2g2280 GRAS 1.2e-79 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed2g2280 - - gmx:100791952 963.37
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed2g2280 2 26273858 26276017 Aed2g2280 2 26273858 26276017 ECH