Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed2g2279 ATGAAGATTCCAAAAGCCCAGGAAATACCACCATATACATCTTGGGTATATGTCCCCAGAAATGTAAGAATGGATGAAGATCAGTTTGTTATTGGTAAAAGACAGATATGCTATGATAACACTAGTGATGAAATGATGATATGTAGTGACAATGAGGAAGATATGGCAAATTACAGAGACACTAGACATGCTTTTACATTTACAGAGAAAGAAGACCTAACTATGAGGGCACCTAGCACACCTGGAGAATATGAGTCTACTAAGGAGATCTTTAACTGTCGTGTGCATGGAACTTCTCAACCTTTAATATATCCGAATGAAAATCAGCTAGTGTGGTCCGAACATGAAGGTGATAAAAAACCATGTAGTGACCATTGTTACCTTATGGATAATGGAGCTGAGAAAGTGCAAGCCGATGAGATGACAAGTAACCTGGATTGGAAACAACTAGAGAAAGATTTGTATATGAAAGGAATAGAAATGTTTGGGAAAAATAGTTGCCTTATAGCCCGCAACATACTTTCTGGCTTTAAGACTTGCTTAGAAGTAGATAGGTACATGTTTGTTGGTGGAGAGTCAATGTCTCAAGGATCCATACCAAGTTCAATCACACACAAAAATGACAAGATTAATACAGAATGCACAGATCAAGAAATGTCACCAACATCACAGTTGTTGCGACAAAAGTACAGAACTGCTTATGGCAAAGACCAATGTAATAAGCAGTATATTCCTTGTGGATGTCAGGGAATATGCACAAAGGAATGCCCTTGTGTCCGTAAAGAAACTAGTCGTTGTGAAAAATATTGCGGGTGTTCAAAACTGTGCCGTAATCGTTTCAAAGGATGCCACTGTATTAAGAGTCAATGCAGAACTCATCTATGCCCGTGCTTTGTAGCCAGACGTGAATGTGACCCAGATACTTGTTGTAATTGTCGTGTTAGTTGCGGTGATGGATCACGGGGAGAGCCACTTCAACACAAAGATAATCAATGTAGAAATATGAATCTTCTTTTAGGAAAAAAAGAGAGGATTTCTTTGGCAAAGTCAAATGTAACACATTGTTTTTCTTATATATGTCAGATTTCTTTGGCAAAGTCAAACGTAGCGGGATGGGGAGCCTTCACAAAGGTTGTGATGTTTGTACTTATTCTAAGATTATGTGATAATGTGTTTTTCTCACTAATTCTTTATGGATTTCAGAAACCAATTATAAAAAATGCTTGTCTGGGAGAATACACGGGTGAACTGATCACTCAAGAAGAAGCAGAGAAACGTGGAAAATTATACGATCGTAACAACCATTCATTCCTTTTTAACCTCAATAATCAGGCAAGTTGGGTTATTGATGCACTTCGCTTTGGGAGTAAGTTAAAATTTGTCAACCACTCATCCAAACCCAATTGCTACCCAAAGGTGTTGCTAGTTGGAGGAGATCATCGGATTGGCATATTTGCCAAGAGAAACATCAAAGCCGGTGAAGAGCTTTTTTATGATTATGGCTATGATGAAGAATGTGCACCAGCATGGGCTCTTCCACCAAAACCCGAGGCTTCCAAGATACATAAGTTAAATGTTTCTGAAGGCAGCACAAAGAAACATCGGTCTCATTGA 1614 0.386 MKIPKAQEIPPYTSWVYVPRNVRMDEDQFVIGKRQICYDNTSDEMMICSDNEEDMANYRDTRHAFTFTEKEDLTMRAPSTPGEYESTKEIFNCRVHGTSQPLIYPNENQLVWSEHEGDKKPCSDHCYLMDNGAEKVQADEMTSNLDWKQLEKDLYMKGIEMFGKNSCLIARNILSGFKTCLEVDRYMFVGGESMSQGSIPSSITHKNDKINTECTDQEMSPTSQLLRQKYRTAYGKDQCNKQYIPCGCQGICTKECPCVRKETSRCEKYCGCSKLCRNRFKGCHCIKSQCRTHLCPCFVARRECDPDTCCNCRVSCGDGSRGEPLQHKDNQCRNMNLLLGKKERISLAKSNVTHCFSYICQISLAKSNVAGWGAFTKVVMFVLILRLCDNVFFSLILYGFQKPIIKNACLGEYTGELITQEEAEKRGKLYDRNNHSFLFNLNNQASWVIDALRFGSKLKFVNHSSKPNCYPKVLLVGGDHRIGIFAKRNIKAGEELFYDYGYDEECAPAWALPPKPEASKIHKLNVSEGSTKKHRSH 537
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed2g2279 537 Pfam SET domain 417 501 IPR001214 GO:0005515
Aed2g2279 537 ProSiteProfiles CXC domain profile. 229 329 IPR026489 -
Aed2g2279 537 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE 2 75 - -
Aed2g2279 537 CDD SET_EZH 360 502 - -
Aed2g2279 537 Gene3D SET domain 243 503 IPR046341 -
Aed2g2279 537 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE E(Z) 137 354 IPR045318 GO:0006338|GO:0018024
Aed2g2279 537 Pfam CXC domain 282 313 IPR041355 -
Aed2g2279 537 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE 90 136 - -
Aed2g2279 537 SMART CXC_2 278 315 IPR033467 -
Aed2g2279 537 ProSiteProfiles SET domain profile. 360 501 IPR001214 GO:0005515
Aed2g2279 537 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE E(Z) 90 136 IPR045318 GO:0006338|GO:0018024
Aed2g2279 537 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE E(Z) 2 75 IPR045318 GO:0006338|GO:0018024
Aed2g2279 537 SUPERFAMILY SET domain 238 504 IPR046341 -
Aed2g2279 537 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE 401 535 - -
Aed2g2279 537 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE 137 354 - -
Aed2g2279 537 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE E(Z) 401 535 IPR045318 GO:0006338|GO:0018024
Aed2g2279 537 SMART set_7 387 507 IPR001214 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed2g2279 Aed-Chr2 26265073 26270175 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed2g2279 404 501 C2H2 Transcription Factor Family AT2G23740 30.088 2.06e-09 58.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Aed2g2279 SET 4.5e-13 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed2g2279 - K11430 gsj:114398888 623.239
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed2g2279 2 26265073 26270175 Aed2g2279 2 26265073 26270175 ECH
Aed2g2279 2 26265073 26270175 Aed8g0656 8 5715479 5723937 PCT