Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed2g2274 ATGGGGTCACCGATTCAACAACGCTCGACGACGACGACGACAAGTTCTGGATCTGAAGGAGGAGATCCGCAAATCGACGAGAGGAAGCGGAAGAGGATGCTATCGAACCGCGAATCCGCTAGGCGATCGCGGATGAGGAAGCAGAAACAGCTTGAGGATTTGACCGATGAAGCTAGCAGATTGCAAGGTGCGAACAAGAAGCTCGCGGATAACATAAAGGCGAAGGAAGAAGCATGCATTGAAACCGAAGCCGCGAACAGCATTCTGAGGGCCCAGACAATGGAACTGGCCGATCGATTGCGCTTCTTGAACTCCATCCTTGAGATTGCTGAAGAGGTCGGAGGGTTATCCGTTGAGATTCCCGAGATTCCAGATCCTCTTCTCAAGCCGTGGCAGATTCCTCATCCGATACAACCGATTATGTTTCTGCGTTGA 435 0.5172 MGSPIQQRSTTTTTSSGSEGGDPQIDERKRKRMLSNRESARRSRMRKQKQLEDLTDEASRLQGANKKLADNIKAKEEACIETEAANSILRAQTMELADRLRFLNSILEIAEEVGGLSVEIPEIPDPLLKPWQIPHPIQPIMFLR 144
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed2g2274 144 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 26 73 IPR004827 GO:0003700|GO:0006355
Aed2g2274 144 PANTHER BZIP TRANSCRIPTION FACTOR 53 11 141 - -
Aed2g2274 144 PANTHER BZIP TRANSCRIPTION FACTOR 44 11 141 - -
Aed2g2274 144 SMART brlzneu 24 88 IPR004827 GO:0003700|GO:0006355
Aed2g2274 144 CDD bZIP_plant_GBF1 29 79 IPR045314 GO:0003700|GO:0006355
Aed2g2274 144 Coils Coil 37 85 - -
Aed2g2274 144 Pfam bZIP transcription factor 28 79 IPR004827 GO:0003700|GO:0006355
Aed2g2274 144 SUPERFAMILY Leucine zipper domain 28 76 IPR046347 GO:0003700|GO:0006355
Aed2g2274 144 MobiDBLite consensus disorder prediction 1 58 - -
Aed2g2274 144 MobiDBLite consensus disorder prediction 1 21 - -
Aed2g2274 144 Gene3D - 26 83 - -
Aed2g2274 144 MobiDBLite consensus disorder prediction 22 58 - -
Aed2g2274 144 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 31 46 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed2g2274 Aed-Chr2 26246738 26247172 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed2g2274 26 140 bZIP Transcription Factor Family AT3G62420 57.391 1.58e-43 139
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Aed2g2274 bZIP_1 8.2e-11 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed2g2274 K25786 - gmx:780550 248.054
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed2g2274 2 26246738 26247172 Aed8g0660 8 5737216 5737653 PCT