Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed2g2272 ACGGTTCTGGCGATCTTACATACTGGAACATTATACATTACGGTGTACCCGATCGCAGCGTATCCTAGACCTAGTATCCTAGAGGCTGTTCTTTTTCCCGCCAATTTGCCTACTTGTTTATATAGTTTCGCGCCCAATTCTCAGACTCGATACCTCAGCACATTTTCCCGCCTCTCTCTGTCTCTCTCTCGCTCTGTAGCCGTTTTCGCCACCATGAGCACCAAGGACCTCAATTTCGATGCAGACATAGCTCTGGCGAAGGATTTTCTTTCCAACTTTGCAGACGCCAATGGCGAAGCCAAATACATGAGCATCCTGCAAGATGTTGCAAATCACAAGACTCGAGCAGTCCAAATCGATCTTGAGGACTTAATTAATTACAAAGATCTGGATGAGGAATTCTTGAGCCGTGTTACTGAGAATACTCGGAGGTATATTGCGATTTTTTCCAGTGCAATTGACGAACTCATGCCGGAGTCCACGGAGGACTTCACAGATGATGACCATGACATATTAATGACTCAGAGATCTGATGAAGGAGCAGAAGGCACTGACGGTTCCGATCCACTTCAGAAGATGCCTGCTGAAATCAAGCCATCTCCAAAAGGGCGACCATCATTTACAATTAGGGAGGTGAAAGCTTCAAACATTGGTCAGCTTGTAAGAATCTCTGGTATTGTGACGCGTTGTTCAGATGTTAAACCATTGATGAAAGTGGCTGTATACACGTGTGAGGATTGTGGATTTGAAATTTACCAGGAAGTAACGGCTCGAGTCTTCATGCCCTTGTTTGAATGTCCATCAACGCGTTGTTCTACAAATAGAAGAAAGGGAAATGCCAAAGTTCAAGAATTAGCTGAACATGTTCCCAAAGGCCATATTCCACGAACAATGACTGTTCATTTAAGAGGAGAACTCACAAGAAAGGTGGCTCCAGGTGATGTGGTTGAATTATCTGGGATTTTTCTTCCTATACCATACACTGGTTTTCGAGCAATGCGTGCGGGCTTAGTTGCTGACACTTACTTAGAGGCCATGTCTGTATCTCATTTCAAGAAAAAATATGAAGAATATGAACTTATAGGAGATGAGGAAGAGCAGATTACACGATTAGCAGAGGATGGTGACATCTACAATAAATTGGCACGATCACTTGCTCCTGAAATTTTTGGACATGAAGACATTAAAAAAGCACTGCTTCTTCTTCTTGTTGGTGCTCCCCATCGGACAATGAGAGATGGAATGAAGATTAGAGGAGATTTACATATATGTTTGATGGGTGATCCTGGTGTTGCCAAGAGTCAGCTTCTTAAACACATAATCAATGTAGCACCCAGAGGTGTGTACACCACTGGCAGAGGAAGTAGTGGAGTTGGTCTAACTGCTGCTGTTCAGAAAGATCCAGTGACAAATGAGATGGTTCTTGAAGGTGGAGCATTGGTGCTAGCGGATATGGGCATTTGCGCCATTGATGAATTTGACAAGATGGACGAATTGGATCGTACTGCTATACATGAAGTTATGGAACAACAGACTGTTAGCATTGCCAAGGCTGGGATCACTACATCGCTGAATGCAAGGACTGCTGTCCTTGCTGCTGCTAATCCAGCATGGGGAAGATATGATCTAAGAAGAACTCCAGCTGAAAACATTAATCTTCCTCATGCCCTCCTATCAAGGTTTGATCTTCTGTGGTTAATCCTTGATCGAGCTGATATGGATAATGATCTTGAAATGGCTAGGCATGTTGTATATGTTCACCAAAATAAGGAGTCTCCCGCTCTAGGATTCACTCCTCTTGAACCATCTGTTCTACGTGCCTACATATCAGCTGCAAGAAGATTGTCTCCTATTGTCCCCCAGGAACTGGAAGAGTATATTGCTACTGCATACTCCAACATTCGTCAAGAAGAAGCAAGGTCCAATGCTCCGCATTCCTACACTACTGTCAGAACATTGCTCAGTATTCTCCGCATATCAGCCGCACTAGCAAGACTCCGTTTTTCTGAAACTGTTGCTCAGAGTGATGTGGATGAAGCACTGAGGCTAATGCAGATGTCAAAATTCTCTTTGTACTCTGAAGAGCGTCAAAAATCTGGTCTGGATGCCATATCTGATATTTATTCCATACTGCGAGATGAAGCTGCTAGAGGTAACCGAATGGATGTCCTCTATACCGATGCACTGAACTGGATATCTAGAAAGGGTTACAGCGAAGCCCAGTTAAATCAGTGCTTGCAGGAGTATGCAGCACTAAATGTATGGCAGATACATCCTCGCACCTTTGACATTAGATTTATTGATGCTTGA 2310 0.4364 TVLAILHTGTLYITVYPIAAYPRPSILEAVLFPANLPTCLYSFAPNSQTRYLSTFSRLSLSLSRSVAVFATMSTKDLNFDADIALAKDFLSNFADANGEAKYMSILQDVANHKTRAVQIDLEDLINYKDLDEEFLSRVTENTRRYIAIFSSAIDELMPESTEDFTDDDHDILMTQRSDEGAEGTDGSDPLQKMPAEIKPSPKGRPSFTIREVKASNIGQLVRISGIVTRCSDVKPLMKVAVYTCEDCGFEIYQEVTARVFMPLFECPSTRCSTNRRKGNAKVQELAEHVPKGHIPRTMTVHLRGELTRKVAPGDVVELSGIFLPIPYTGFRAMRAGLVADTYLEAMSVSHFKKKYEEYELIGDEEEQITRLAEDGDIYNKLARSLAPEIFGHEDIKKALLLLLVGAPHRTMRDGMKIRGDLHICLMGDPGVAKSQLLKHIINVAPRGVYTTGRGSSGVGLTAAVQKDPVTNEMVLEGGALVLADMGICAIDEFDKMDELDRTAIHEVMEQQTVSIAKAGITTSLNARTAVLAAANPAWGRYDLRRTPAENINLPHALLSRFDLLWLILDRADMDNDLEMARHVVYVHQNKESPALGFTPLEPSVLRAYISAARRLSPIVPQELEEYIATAYSNIRQEEARSNAPHSYTTVRTLLSILRISAALARLRFSETVAQSDVDEALRLMQMSKFSLYSEERQKSGLDAISDIYSILRDEAARGNRMDVLYTDALNWISRKGYSEAQLNQCLQEYAALNVWQIHPRTFDIRFIDA 769
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed2g2272 769 Pfam MCM AAA-lid domain 604 687 IPR041562 -
Aed2g2272 769 Gene3D - 207 353 IPR012340 -
Aed2g2272 769 ProSiteProfiles MCM family domain profile. 377 583 IPR001208 GO:0003677|GO:0005524|GO:0032508
Aed2g2272 769 SUPERFAMILY Nucleic acid-binding proteins 86 345 IPR012340 -
Aed2g2272 769 Pfam MCM OB domain 209 324 IPR033762 -
Aed2g2272 769 SMART AAA_5 419 572 IPR003593 -
Aed2g2272 769 Pfam MCM P-loop domain 365 587 IPR001208 GO:0003677|GO:0005524|GO:0032508
Aed2g2272 769 SMART mcm 205 689 IPR031327 GO:0003677|GO:0005524|GO:0032508
Aed2g2272 769 MobiDBLite consensus disorder prediction 178 206 - -
Aed2g2272 769 PANTHER DNA REPLICATION LICENSING FACTOR MCM FAMILY MEMBER 109 747 IPR031327 GO:0003677|GO:0005524|GO:0032508
Aed2g2272 769 Gene3D - 362 692 IPR027417 -
Aed2g2272 769 Gene3D - 83 174 - -
Aed2g2272 769 PRINTS Mini-chromosome maintenance (MCM) protein family signature 506 519 IPR001208 GO:0003677|GO:0005524|GO:0032508
Aed2g2272 769 PRINTS Mini-chromosome maintenance (MCM) protein family signature 557 565 IPR001208 GO:0003677|GO:0005524|GO:0032508
Aed2g2272 769 PRINTS Mini-chromosome maintenance (MCM) protein family signature 418 433 IPR001208 GO:0003677|GO:0005524|GO:0032508
Aed2g2272 769 PRINTS Mini-chromosome maintenance (MCM) protein family signature 478 492 IPR001208 GO:0003677|GO:0005524|GO:0032508
Aed2g2272 769 PRINTS Mini-chromosome maintenance (MCM) protein family signature 530 542 IPR001208 GO:0003677|GO:0005524|GO:0032508
Aed2g2272 769 CDD MCM7 380 687 IPR008050 GO:0003677|GO:0003678|GO:0005524|GO:0006270|GO:0042555
Aed2g2272 769 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 387 697 IPR027417 -
Aed2g2272 769 PANTHER DNA REPLICATION LICENSING FACTOR MCM7 109 747 IPR008050 GO:0003677|GO:0003678|GO:0005524|GO:0006270|GO:0042555
Aed2g2272 769 Pfam MCM N-terminal domain 87 172 IPR027925 -
Aed2g2272 769 PRINTS Mini-chromosome maintenance (MCM) protein 7 signature 224 235 IPR008050 GO:0003677|GO:0003678|GO:0005524|GO:0006270|GO:0042555
Aed2g2272 769 PRINTS Mini-chromosome maintenance (MCM) protein 7 signature 259 271 IPR008050 GO:0003677|GO:0003678|GO:0005524|GO:0006270|GO:0042555
Aed2g2272 769 PRINTS Mini-chromosome maintenance (MCM) protein 7 signature 242 253 IPR008050 GO:0003677|GO:0003678|GO:0005524|GO:0006270|GO:0042555
Aed2g2272 769 ProSitePatterns MCM family signature. 486 494 IPR018525 GO:0003677|GO:0005524|GO:0006260
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed2g2272 Aed-Chr2 26223951 26229355 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed2g2272 75 767 Core DNA Replication Machinery Family AT4G02060 80.753 0.0 1196
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed2g2272 K02210 - gmx:100811639 1275
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed2g2272 2 26223951 26229355 Aed2g2272 2 26223951 26229355 ECH