Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed2g2271 ATGGTGATGCACATAGAGCACCATGTGAATTTGAATTCGGAAAATGTTCTCTCCCAATTCCAATCCGAAATTGAGCATTCGGCTGGACTGATACACCCTATAAATTCGTCCTCAACCATTTTTGCAAAACTTTTGAGTTCAACTCTAAATAATTCCAACATTTCATTCACTGATATCAAGACCAAGGTGGCTCCGTTATTATTTCAAGCATTTGAGATGGTTCCTCACTTGGCACAAATTTCATACATAGGAACCGAAGGTCAATTTTTCTCATACTACACTGATCATGATAAAGTTTTGGCAATGTACTCAAATTTAAGCGTATACTATATCCAGCCCGTAAATCGTGACACTGGAGAGTTATATGGGAAAGCCATAATATCTGAATTACCCTCTAATAGTACCCATGCAAATTGGTTTGTGAAAGCAGTTAATAGTTCATATGGGTGTGTCTCATTGGAAACCAAGTGGAACAATGTTCACGATCTTTTATTCATTAGTTCAGCTAGAATCAAGGGGACACAAGTGGTCTCTCTAGGTTTTCCAGTAACTAGTATAACTGATTTTTTCACTCGGGTTGGTCACCAAGGTGCAAGTTTCTCTTTGGTGACCAAAAATGGAGAAGTGCTTGTAGAAGGGATCCAAAACAATCGTTTGGCCTTTTCTAATGACATGGTTTCGTTCCAATCAGAGAATGGAAATGGTGTTCAAACCGTTTCATGCAAAGATGGAGAAGCTTCTTCTGTTTTGAATATTCAGGATGTTGAGTATCTAATTCGCTGCTCCCCTGTTGATATAATGGGAATAGAATCGGTGTATGTTTTGGGTGTACCACGAAATGGATTGGACCGGTTTGTTCTGAACATTAAGAAAAAAGGACTGATGCTATTCACTGCAATGATCTTCACGATAGTCACTGCCATAGTCAGTTTTCTCTCTATATATGTTCGATCACTAAGGCGAGAAATGCATTTGTGTTGGTCACTGATCAAACAAAATGAAGCCACACAACAAGCTGAGCGAAAGTGTATGAAAAAGAGCCTTGCTTTTGCTAGTGCCAGCCATGATGTTCGCGCTTCGTTGGCAGGTCTTACTGGTTTGATAGAGATGTCTTGTCATGCCCCTGCTTCTGAATTAGGGACCAACTTGAGACAAATGGATTCTTGTACCAAAGATTTACTAGGACTATTGAATTCTATACTTGATACGAGCAAAGTTGAAGCGGGAAAAATGCCTCTTGAGGAAGAGGAATTTGATCTATTTCAACTACTAGAAGATGTGATTGATTTATACCATTCTGTGGCTATGAAGAAAGGAGTAGATATTGTGTTGGACACTTGTAATGGTTCTGTACTCAAATTTTCACGCACAAAAGGTGACAGAGGGAAACTGAAACAAGTTTTGTGCAATTTACTGAGTAATGCAGTTAAATTTACTGAGGAGGGGCACATAGCAGTTCGAGCATGGGCTCAGAAGCCAAGCTTGCAGAGCTCAATGATCGCTACTCATCGATACGGGTCAAGTAGACTTTTGTCACGCTTGTTGTGTTGCAGGAAAAATGAAGCACGTGATGAAGTGGAAGACGTGAATTCAATCCAACAAGATCCAAATAGTATGGATTTTACTTTTGAAGTGGATGACACTGGCAAGGGAATTCCTAAAGAGAAGCACAAGTCTGTGTTTGAGAATTATGTCCAAGTCAAAGAAACTGCTCTTGGCCAAGGAGGAACTGGCTTGGGACTTGGTATTGTGCAGTCGCTGGTACGTTTGATGCATGGAGATATTGAAATCATGGACAAGGATATTGGTGATAAGGGAACCTGCTTTAGGTTCAACGTACTCCTGATTTTCCATGAGACAGAGATGAATGATGACACAAGAGATGACCAAGTTGGATCAGGTAACAGAAATCAATCTCATGGACTAACCATGAGTCCCAAGTTATCAATTTGGAACCGTAGTCCTAGATCCGAGGCATCTCGAGTTGTTCTTTTGATTCACAACGAGGAGCGTCGAAGGACTACACAGAGGTTCATGGAGGGGTTAGGGATCAAAGTTAAGGTTGTGAAGGAGTGGAAACAACTTCATTACACTCTGAAGAAGATCATCAAACAAAAGGGTCTCCATCCAAATAATTCAAGCTCGCCGGGGTCTTCAGATTCTCCCTCTCCATCACTTGGAACCAACGCAGTTCAATCTTTGAGTGCACAAGATGGAACTGACTATACAAGTTCAATCTTCATGAGGACAGCTATTGAAGCTTCCTCGGGTTTCGTCCTGATTGTAATTGATGCAAATGCAGGACCCTTTTCAGAGCTTTGCAAAGTGGTATCTGAGTTCAAAAGAGGCCTTTGTTATCCTTGTAGGGTGGTTTGGTTGGAGAATCCACTTATGCCTGCTGTGAACTACATAATCCTTAACAAGGATGTTTCTAATTCAAACGACATTGTCTTAACTAAGCCACTTCATGGTCATCGTTTATTCCAAGTTACAAGGATTCTCCCCGAGTATGGGGGTGTTTGGCAATGCAATTCTAGTGGAACAAATAAAGAAAGTGGTCAAGTTTACTCAACTGATGAAGGTGCACTTCAAAAAAGTGTTGAACTACAAGAGTGTGGCAGCTCAAGTGTTACACAGCAATCCTTAGAAGGGCAATCTTATGATGATAGATATATAACAAGAAAATCTCCTGTCCACCAAGGAGAAATACAAGAATGTGAAGAGTCAAGCAATGACAAACCACCCTTGTGGAGCATGAATTTTTTGGTTGTTGAAGACATGCTTTTGTTACGTAGGATAACCAAGTCTACTCTGATTCGGTTTGGTGCTTCTGTCATAGAATGTGAGAATGGTGAACAAGCTGTTCGGATAGTTGAAGAGGGTCTAACTAGGAATTCTTCCAATCCTCCATTTGATTTCATCTTAATGGATTGCCAGATGCCGATAATGGATGGATATGAGGCAACGAGACAGATAAGGGAGATAGAGAAGTCTCATGGTGTTCACATTCCTATCTTTGCATTAACCGCCAATACAGGGGAAGAGGCAAAAATGTCCATTGAAGCTGGAATGGATGATCACTTAATCAAACCCATCGACAGAGAGGCTTTACTTAAAGCCATAAAAGAATGTATACACAGAGTACTATATAGTGAACAATATTGTTTAATTTGA 3174 0.4045 MVMHIEHHVNLNSENVLSQFQSEIEHSAGLIHPINSSSTIFAKLLSSTLNNSNISFTDIKTKVAPLLFQAFEMVPHLAQISYIGTEGQFFSYYTDHDKVLAMYSNLSVYYIQPVNRDTGELYGKAIISELPSNSTHANWFVKAVNSSYGCVSLETKWNNVHDLLFISSARIKGTQVVSLGFPVTSITDFFTRVGHQGASFSLVTKNGEVLVEGIQNNRLAFSNDMVSFQSENGNGVQTVSCKDGEASSVLNIQDVEYLIRCSPVDIMGIESVYVLGVPRNGLDRFVLNIKKKGLMLFTAMIFTIVTAIVSFLSIYVRSLRREMHLCWSLIKQNEATQQAERKCMKKSLAFASASHDVRASLAGLTGLIEMSCHAPASELGTNLRQMDSCTKDLLGLLNSILDTSKVEAGKMPLEEEEFDLFQLLEDVIDLYHSVAMKKGVDIVLDTCNGSVLKFSRTKGDRGKLKQVLCNLLSNAVKFTEEGHIAVRAWAQKPSLQSSMIATHRYGSSRLLSRLLCCRKNEARDEVEDVNSIQQDPNSMDFTFEVDDTGKGIPKEKHKSVFENYVQVKETALGQGGTGLGLGIVQSLVRLMHGDIEIMDKDIGDKGTCFRFNVLLIFHETEMNDDTRDDQVGSGNRNQSHGLTMSPKLSIWNRSPRSEASRVVLLIHNEERRRTTQRFMEGLGIKVKVVKEWKQLHYTLKKIIKQKGLHPNNSSSPGSSDSPSPSLGTNAVQSLSAQDGTDYTSSIFMRTAIEASSGFVLIVIDANAGPFSELCKVVSEFKRGLCYPCRVVWLENPLMPAVNYIILNKDVSNSNDIVLTKPLHGHRLFQVTRILPEYGGVWQCNSSGTNKESGQVYSTDEGALQKSVELQECGSSSVTQQSLEGQSYDDRYITRKSPVHQGEIQECEESSNDKPPLWSMNFLVVEDMLLLRRITKSTLIRFGASVIECENGEQAVRIVEEGLTRNSSNPPFDFILMDCQMPIMDGYEATRQIREIEKSHGVHIPIFALTANTGEEAKMSIEAGMDDHLIKPIDREALLKAIKECIHRVLYSEQYCLI 1057
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed2g2271 1057 PRINTS Bacterial sensor protein C-terminal signature 559 569 IPR004358 GO:0016310|GO:0016772
Aed2g2271 1057 PRINTS Bacterial sensor protein C-terminal signature 541 555 IPR004358 GO:0016310|GO:0016772
Aed2g2271 1057 PRINTS Bacterial sensor protein C-terminal signature 575 593 IPR004358 GO:0016310|GO:0016772
Aed2g2271 1057 MobiDBLite consensus disorder prediction 632 646 - -
Aed2g2271 1057 PANTHER TWO-COMPONENT HISTIDINE KINASE 4 1044 - -
Aed2g2271 1057 SUPERFAMILY Homodimeric domain of signal transducing histidine kinase 332 411 IPR036097 GO:0000155|GO:0007165
Aed2g2271 1057 Gene3D - 331 409 - -
Aed2g2271 1057 SMART HisKA_10 345 409 IPR003661 GO:0000155|GO:0007165
Aed2g2271 1057 SMART REC_2 919 1041 IPR001789 GO:0000160
Aed2g2271 1057 SUPERFAMILY CheY-like 919 1049 IPR011006 -
Aed2g2271 1057 Gene3D - 410 618 IPR036890 -
Aed2g2271 1057 ProSiteProfiles Histidine kinase domain profile. 352 617 IPR005467 -
Aed2g2271 1057 Pfam Response regulator receiver domain 922 1042 IPR001789 GO:0000160
Aed2g2271 1057 PANTHER HISTIDINE KINASE CKI1-LIKE 4 1044 - -
Aed2g2271 1057 SMART HKATPase_4 459 617 IPR003594 -
Aed2g2271 1057 CDD HisKA 346 405 IPR003661 GO:0000155|GO:0007165
Aed2g2271 1057 SUPERFAMILY ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 398 613 IPR036890 -
Aed2g2271 1057 Pfam Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 459 613 IPR003594 -
Aed2g2271 1057 ProSiteProfiles Response regulatory domain profile. 920 1045 IPR001789 GO:0000160
Aed2g2271 1057 MobiDBLite consensus disorder prediction 707 731 - -
Aed2g2271 1057 CDD REC_hyHK_CKI1_RcsC-like 921 1041 - -
Aed2g2271 1057 MobiDBLite consensus disorder prediction 624 646 - -
Aed2g2271 1057 Gene3D - 898 1048 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed2g2271 Aed-Chr2 26219481 26223300 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed2g2271 13 1036 Histidine Kinase Gene Family AT2G47430 40.850 0.0 709
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Aed2g2271 HATPase_c 3.6e-26 CL0025
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed2g2271 - - gmx:100790376 1627.45