Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed2g2269 ATGGCAGAGGTTGTTTTGCTAGTTGATGATTTGAAATTACTTTCTGCGATTCCTCGCTGTAGAATTTGTCATGAAGAAGAGTTTGAAAGCGTAGAAACCTTGGAAGCACCTTGTGCTTGTTCTGGGACCGTTAAGTTTGCTCATAGAGATTGCGTACAGAGATGGTGCAACGAAAAAGGAAATACAACCTGTGAAATATGTCTCCAGCAATATGAACCCGGTTATATAGCTCCGCCAAAGAAGTCTAAGATAAATGATGATGCAATGTCCATTAGGGAGGTGGAAGAACCGTCAAGCGCAAGAATAGAGATTATAGTTGAAGGAGTGGCAATAGAAAGTGATTACTCTGAATGCAGTTCTGCCGCTGACAGAAGCGCGTCTTGCTGTCGATCACTTGCAATAGCTTTTACACTAGTCTTACTTGTAAGACATCTTTTCGCAGTGCTTACAAATGGAACGGAAGATTACCCATTTACACTACTTACTGTAATTATATTGAAGGCTAGCGGAATTATTATACCTATGTACATAGTTGTTAAGATTATCGGAGCCATTCACTACAGTATTCTGCACTATCAAGATTCTAACTATGACACGTCAATGTCAGACGAAGATGAGATACAGCATAATATCGAAATGCACCTTCCCTTGTCTTGCCCTATGCAACATTCACTATCTGGGTCACCCACCCTGCCCAAGGCTAACAATAAAGTACTAGTACTAGGTACTTGGGGCTTCTGGCCCCGTCAGTTATCATAA 759 0.4124 MAEVVLLVDDLKLLSAIPRCRICHEEEFESVETLEAPCACSGTVKFAHRDCVQRWCNEKGNTTCEICLQQYEPGYIAPPKKSKINDDAMSIREVEEPSSARIEIIVEGVAIESDYSECSSAADRSASCCRSLAIAFTLVLLVRHLFAVLTNGTEDYPFTLLTVIILKASGIIIPMYIVVKIIGAIHYSILHYQDSNYDTSMSDEDEIQHNIEMHLPLSCPMQHSLSGSPTLPKANNKVLVLGTWGFWPRQLS 252
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed2g2269 252 Pfam Protein of unknown function (DUF3675) 73 182 IPR022143 -
Aed2g2269 252 PANTHER AMINOACYLTRANSFERASE, E1 UBIQUITIN-ACTIVATING ENZYME-RELATED 1 206 - -
Aed2g2269 252 PANTHER RING/FYVE/PHD ZINC FINGER DOMAIN-CONTAINING 1 206 IPR033275 -
Aed2g2269 252 SMART ringv_2 19 68 IPR011016 GO:0008270
Aed2g2269 252 CDD RING_CH-C4HC3_MARCH 20 67 - -
Aed2g2269 252 ProSiteProfiles Zinc finger RING-type profile. 20 67 IPR001841 -
Aed2g2269 252 Pfam RING-variant domain 20 67 IPR011016 GO:0008270
Aed2g2269 252 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 13 76 IPR013083 -
Aed2g2269 252 ProSiteProfiles Zinc finger RING-CH-type profile. 12 74 IPR011016 GO:0008270
Aed2g2269 252 SUPERFAMILY RING/U-box 19 72 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed2g2269 Aed-Chr2 26204288 26206656 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed2g2269 20 67 C3H Transcription Factor Family AT2G37950 42.857 3.96e-06 44.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed2g2269 - - gmx:100802379 365.54
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed2g2269 2 26204288 26206656 Aed2g2269 2 26204288 26206656 ECH
Aed2g2269 2 26204288 26206656 Aed8g0664 8 5786935 5789528 PCT