Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed2g2261 ATGGTAAGGGCTCCTTGTTGTGCGAAAGTTGGATTGAGGAAGGGAAGGTGGACAACGGAGGAGGATGACATTTTGACCAAGTACATTCAGGCCAATGGAGAAGGTTCCTGGAGATCATTGCCAAAAAATGCAGTTAATAAGTTTGCTAATAGCTTAGGGCCGCGATACACGAATCTCGTGTGTTGA 186 0.457 MVRAPCCAKVGLRKGRWTTEEDDILTKYIQANGEGSWRSLPKNAVNKFANSLGPRYTNLVC 61
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed2g2261 61 SUPERFAMILY Homeodomain-like 8 59 IPR009057 -
Aed2g2261 61 CDD SANT 16 60 IPR001005 -
Aed2g2261 61 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 61 IPR017930 -
Aed2g2261 61 Pfam Myb-like DNA-binding domain 14 58 IPR001005 -
Aed2g2261 61 Gene3D - 11 61 - -
Aed2g2261 61 PANTHER MYB TRANSCRIPTION FACTOR 2 44 - -
Aed2g2261 61 PANTHER TRANSCRIPTION FACTOR MYB8-RELATED-RELATED 2 44 - -
Aed2g2261 61 ProSiteProfiles Myb-like domain profile. 9 60 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed2g2261 Aed-Chr2 26135553 26136335 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed2g2261 1 44 MYB Transcription Factor Family AT5G49330 79.545 4.27e-21 81.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Aed2g2261 Myb_DNA-binding 1.7e-06 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed2g2261 K09422 - gmx:100817316 90.8929