Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed2g2260 ATGAGTGTGGGTAAATTGTTCAGGTGGTCGTTGATAGCAAGTCACTTGCCTGGAAGAACAGACAACGAGATAAAAAACTATTGGAATTCTTATTTGAGCAGAAAAATTTACACTTTTCGTGGGACAACTACTAAAGACATCATCACGCTACCTCCTAGGCGCAAACGTGGTAGGACCAGCCGTTGGGCCATGACCATGAGCCTGAAGAACAACAAAACCCAACAACAACAGCAAAGCCCAAAACAAATTCATCAAGAAGCACCAACCCCGCCACTTGAGACTGAAAAGTATTTGTCAACCAATAATATATTGAAGGAACAAGTAGATGGGTCGAGTACTATTAGTAGTACTACTACTACTCAAGACGAAGAAAACGTAGGTGAGAAAGAAGAAATAATAATAAAAGACAACGACGACGACGACATATGGGGACCGTATGACGAGGAAGTTATTAATGGAGGATTATTGAGTTTTGATGATGTCATGGACAATTGCTGGCTGGAGGAAGAAGCAAGTGGGGTTTGGACCATTTCTGCTCATGAACCAGGACACAGCAATATTAATATTATTGATGATACTATTATTATGGTTGGGAATGAAAAGGGTGGTGGTGATCACGACACGTCTACCAACTTAATGATTTCGAGTACTGGGGGAGAGTTGCATTCTAGTTCCTCTTCCATGGATCAAAACCTCCTCACTTGGCTCTGGGAAGATCAAGACTGGGAAAAGGATTTTCAGAGCTTTAGAGAGATTCATAGTGACAAACAAAATGTCATGGTTGATTGGTTTCTCTCTTCAACTTAA 807 0.4102 MSVGKLFRWSLIASHLPGRTDNEIKNYWNSYLSRKIYTFRGTTTKDIITLPPRRKRGRTSRWAMTMSLKNNKTQQQQQSPKQIHQEAPTPPLETEKYLSTNNILKEQVDGSSTISSTTTTQDEENVGEKEEIIIKDNDDDDIWGPYDEEVINGGLLSFDDVMDNCWLEEEASGVWTISAHEPGHSNINIIDDTIIMVGNEKGGGDHDTSTNLMISSTGGELHSSSSSMDQNLLTWLWEDQDWEKDFQSFREIHSDKQNVMVDWFLSST 268
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed2g2260 268 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 1 36 IPR017930 -
Aed2g2260 268 MobiDBLite consensus disorder prediction 70 85 - -
Aed2g2260 268 CDD SANT 8 32 IPR001005 -
Aed2g2260 268 ProSiteProfiles Myb-like domain profile. 1 32 IPR001005 -
Aed2g2260 268 PANTHER TRANSCRIPTION FACTOR MYB8-RELATED-RELATED 8 180 - -
Aed2g2260 268 Gene3D - 2 36 - -
Aed2g2260 268 PANTHER MYB-RELATED PROTEIN P 8 180 - -
Aed2g2260 268 Pfam Myb-like DNA-binding domain 8 32 IPR001005 -
Aed2g2260 268 MobiDBLite consensus disorder prediction 70 93 - -
Aed2g2260 268 SUPERFAMILY Homeodomain-like 7 37 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed2g2260 Aed-Chr2 26132766 26133572 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed2g2260 8 64 MYB Transcription Factor Family AT2G47460 54.930 1.17e-15 73.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Aed2g2260 Myb_DNA-binding 2.9e-07 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed2g2260 K09422 - gmx:100817316 288.115