Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed2g2247 ATGGGAATCGATTTGAAGGCAGGAGGTAAGTCGAAGAAGACGAAGCGAACGGCACCGAAATCCAATGATATCTACCTGAAGCTCCTGGTGAAGCTCTACCGTTTTCTCGTTCGGAGGACTGGGAGTAACTTCAACGCCGTCGTCCTCAAGCGCCTTTTCATGAGCAAGGTCAACAAGGCCCCGTTATCCCTCTCCAGATTGATCCGTTACACCAAGGGAAAGGAGGGTAAGATAGCTGTGGTTGTCGGTGCTGTGACCGATGACATTAGGGTCTATGAAGTCCCTGCTCTGAAGGTAACTGCTCTCAGGTTCACTGAAACTGCCAGAGCTAGAATTGAGAAGGCTGGTGGGGAATGCCTCACCTTCGATCAATTGGCCCTCAGAGCTCCACTCGGCCAGAACACGGTTCTTCTTAGAGGTCCCAAGAATGCCCGTGAGGCTGTCAAGCATTTTGGACCAGCTCCTGGTGTGCCCCATAGCCACACTAAGCCATATGTCCGTTCCAAGGGAAGGAAATATGAGCGGGCTAGAGGAAGAAGGAAGAGCAGAGGCTTTAGAGTTTGA 564 0.516 MGIDLKAGGKSKKTKRTAPKSNDIYLKLLVKLYRFLVRRTGSNFNAVVLKRLFMSKVNKAPLSLSRLIRYTKGKEGKIAVVVGAVTDDIRVYEVPALKVTALRFTETARARIEKAGGECLTFDQLALRAPLGQNTVLLRGPKNAREAVKHFGPAPGVPHSHTKPYVRSKGRKYERARGRRKSRGFRV 187
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed2g2247 187 MobiDBLite consensus disorder prediction 151 187 - -
Aed2g2247 187 SUPERFAMILY Ribosomal proteins L15p and L18e 20 139 IPR036227 -
Aed2g2247 187 Pfam Ribosomal protein 60S L18 and 50S L18e 2 187 IPR021131 -
Aed2g2247 187 Gene3D - 1 187 - -
Aed2g2247 187 PANTHER 60S RIBOSOMAL PROTEIN L18-1-RELATED 1 186 - -
Aed2g2247 187 PANTHER 60S RIBOSOMAL PROTEIN L18 1 186 IPR000039 GO:0003735|GO:0005840|GO:0006412
Aed2g2247 187 MobiDBLite consensus disorder prediction 164 187 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed2g2247 Aed-Chr2 26051327 26053048 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed2g2247 3 187 Cytoplasmic Ribosomal Protein Gene Family AT2G47570 80.108 1.19e-106 301
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed2g2247 K02883 - gmx:100306301 322.783