Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed2g2242 ATGGCTTCGAAGCTTTGTTTCTCCATATTTCTCATTCTCTTTCCATTATTTGCTTCCTCAGACAGTACTGCTCCAAATCCCAACACTCCCGTCTCCCCCGGAACCGCATGCAAATCCACCCCAGACCCATCGTATTGCAAATCCGTTCTCCCACCCCAAAACGGCAACGTTTACGACTATGGTCGAATCTCGGTGAAAAAGTCAGTCTCACAAGCCCGCAAGTTCCTGAACCTAGTTGATAAATACCTCCAACGTCGCTCTTCTCTTTCCACCACCGCTATCCGTGCACTTCAAGATTGCCGCACTCTCGGAGAACTCAACTTGGATTTTCTCTCTAGCTCCTTCCAAACAGTGAACAAGACAACAAGGTTTCTTCCTAGTTTTCAAGCCGACGATATTCAAACCCTACTCAGCGCCATTTTAACCAACCAGCAAACATGCTTGGACGGTCTCAAAGACACTGCTTCAGCATGGAGCGTGCGAAACGGTCTCACTATCCCACTCTCCAACGACACCAAACTCTACAGCGTCTCACTCGCTCTCTTCACCAAGGGTTGGGTCCCCAGAACCAAAGTCAGCGCAATGCACCCAACCAAGAAACAACTCGGATTCAAAAACGGCCGTTTGCCGCTTAAGATGTCGAGCAGAACCCGCGCGATCTACGAGTCCGTGAGTAGGAGGAAGCTCCTTCAGGCCACGGTGTCGGTGGGTGACGAGGTTGTGGTGAGGGATATTGTGACGGTGAGCCAAGATGGAAGCGGAAACTTCACCACTATCAATGATGCAATTGCGGCGGCTCCTAACAAATCTGTCTCTACTGATGGCTACTTCCTTATCTATGTCACTGCCGGTGTGTACGAGGAAAATGTGTCCATTGATAAGAAGAAGACGTACTTGATGATGGTTGGGGATGGTATCAACAAGACAATTATCACAAGCAATCGTAGCGTCGTCGATGGCTGGACAACCTTCAGCTCCGCCACATTTGTTGTGGTTGGGCAAGGATTTGTGGGTGTGAATATGACCATCCGAAACACCGCCGGGGCCGTGAAGCACCAAGCAGTTGCACTTCGAAGCGGAGCAGATTTGTCGACGTTTTACAGTTGCAGCTTCGAGGGGTACCAAGACACGTTATACGTACACTCCCTGAGACAATTCTACAGCGAATGCGACATCTACGGCACGGTAGATTTCATCTTCGGAAACGCCAAGGTTGTCTTCCAAAACTGCAACATGTATCCTCGTCTCCCCATGAGTGGTCAATTCAACGCGATCACTGCACAAGGAAGAACAGACCCGAACCAAGACACGGGCATTTCAATCCACAACTGCACCGTTAGAGCAGCCGATGATTTGGCTGCGAGCAACGGCACCGTTGCAACGTATTTGGGAAGGCCGTGGAAGGAGTATTCTAGAACGGTTTATATGCAAACTTCTATGGATAGTGTGATCAACGCTAAGGGGTGGCGTGAATGGGACGCTGATTTTGCTTTAAGCACTTTGTATTACGCTGAGTATAGCAACACTGGGCCAGGGTCTGCCACCGACAATAGAGTGACGTGGCCTGGTTATCATGTTATTAATGCCACCGATGCAGCTAACTTTACGGTGTCCAATTTTTTGCTTGGAGATGATTGGTTGCCCCAGACAGGAGTCACTTATACCAATAACTTGGTATAG 1680 0.4923 MASKLCFSIFLILFPLFASSDSTAPNPNTPVSPGTACKSTPDPSYCKSVLPPQNGNVYDYGRISVKKSVSQARKFLNLVDKYLQRRSSLSTTAIRALQDCRTLGELNLDFLSSSFQTVNKTTRFLPSFQADDIQTLLSAILTNQQTCLDGLKDTASAWSVRNGLTIPLSNDTKLYSVSLALFTKGWVPRTKVSAMHPTKKQLGFKNGRLPLKMSSRTRAIYESVSRRKLLQATVSVGDEVVVRDIVTVSQDGSGNFTTINDAIAAAPNKSVSTDGYFLIYVTAGVYEENVSIDKKKTYLMMVGDGINKTIITSNRSVVDGWTTFSSATFVVVGQGFVGVNMTIRNTAGAVKHQAVALRSGADLSTFYSCSFEGYQDTLYVHSLRQFYSECDIYGTVDFIFGNAKVVFQNCNMYPRLPMSGQFNAITAQGRTDPNQDTGISIHNCTVRAADDLAASNGTVATYLGRPWKEYSRTVYMQTSMDSVINAKGWREWDADFALSTLYYAEYSNTGPGSATDNRVTWPGYHVINATDAANFTVSNFLLGDDWLPQTGVTYTNNLV 559
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed2g2242 559 Pfam Plant invertase/pectin methylesterase inhibitor 35 181 IPR006501 GO:0004857
Aed2g2242 559 Gene3D Invertase/pectin methylesterase inhibitor family protein 34 184 IPR035513 -
Aed2g2242 559 ProSitePatterns Pectinesterase signature 2. 392 401 IPR033131 -
Aed2g2242 559 PANTHER PECTINESTERASE 14 557 - -
Aed2g2242 559 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 35 184 IPR035513 -
Aed2g2242 559 Pfam Pectinesterase 246 544 IPR000070 GO:0030599|GO:0042545
Aed2g2242 559 SMART PMEI_2 28 181 IPR006501 GO:0004857
Aed2g2242 559 CDD PMEI-like_3 35 186 - -
Aed2g2242 559 PANTHER PECTINESTERASE/PECTINESTERASE INHIBITOR 7-RELATED 14 557 - -
Aed2g2242 559 Gene3D - 240 558 IPR012334 -
Aed2g2242 559 SUPERFAMILY Pectin lyase-like 242 555 IPR011050 -
Aed2g2242 559 TIGRFAM PME_inhib: pectinesterase inhibitor domain 1 182 IPR006501 GO:0004857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed2g2242 Aed-Chr2 26029613 26031990 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed2g2242 8 559 Carbohydrate Esterase AT4G02330 63.732 0.0 733
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed2g2242 K01051 - gmx:100800971 1054.66
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed2g2242 2 26029613 26031990 Aed8g0705 8 6079546 6081359 PCT