Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed2g2241 ATGGCTTTCAACAACTTGTTCGTTCTTACGCTCTGTGTTTCTCTTGTGCTATCCTTCTTGACATCAATTACCATAGCTGATAATAACCACCATGCACCCGTTCCACCAGAAACCATATGCTACACAACCTTAAACCCTTCTTACTGCAAACTCGTGCTTGAAAATCAAAATGGTAGCATATATGACTATTGCCGCATTTCTGTTAGAAATTCCTTGTCTCAGTCTCAAGGACTACAGACTTCAGCTTCGGATCCAAGAGTGAAGAACGATCTTTCTTCCCAACTCTCGGAAAATTCAAAGCTTGACAGTGTCTCGCTTTATTTGTTCACCAAGGCTTGGGATTCTGAGAACAAATTAATGTCAACATCATGGCAGCAACACCAGAATGATCATCGTTTACCTTTGAAGATGTCAAACAAAGTACGTGCCATTTATGATTCCGCCAAAGGCCGGGGGAGAAAATTACTTCAAACAATGGATGATGATGATGATGAAAGCGTGGTGGTGAGTGATATTGCGGTGGTTAGTAAGGATGGAAGCGGAAACTTTACCACTATCAATGATGCCATAGCTGCTGCACCAAATAACACAGCTGCTACCGATGGCTACTTCATTATTTTGATCGCTGAAGGTGTATATCAAGAGTATGTATCTATAGCCAAAAACAAGAAGTTTCTGATGCTAATTGGAGAAGGAATCAATCGGACAATCATCACTGGCGATCACAACGTTGTTGATGGCTTTACAACATTTAACTCTGCCACATTTGCTGTGGTGGCACAAGGATTCGTAGCAATGAACATAACATTCCGCAACACTGCTGGGCCAAGCAAGCACCAAGCAGTTGCAGTAAGAAATGGAGCGGACATGTCCACATTCTACCGCTGTAGCTTTGAAGGGTACCAAGACACTCTATACACGCATTCTCTGAGGCAGTTTTACCGCGAATGTGACATATATGGCACAGTCGACTTCATATTTGGAAATGCAGCTGCTGTTCTGCAAAAATGCAACATGTATCCCCGCCTTCCAATGACTGGACAATTCAATGCCATCACAGCGCAAGGTCGAACTGATCCAAATCAAAACACTGGAATTTCGATACAAAATGCGACCATTAAAGCAGCACAGGATCTGGCTCCAGTGGTTGCTACTGTGGAAACATATCTTGGGAGGCCATGGAAGGAGTATTCAAGGACGGTTTACATGCAGTCTTTCATGGATAGTTTGATAGCTCCTGCTGGTTGGCGTGAATGGAATGGTAATTTTGCACTCAGCACTTTGTACTATGCAGAGTATGATAACACAGGTCCTGGTTCAAATACTGGCAACCGAGTCAACTGGCCTGGCTATCATGTTATTGATGCTACTGATGCAGCTAATTTTACTGTGTCTAACTTCTTGGATGGGGATGCTTGGCTGCCTCAAACTACCGTTCCATATTAG 1446 0.4322 MAFNNLFVLTLCVSLVLSFLTSITIADNNHHAPVPPETICYTTLNPSYCKLVLENQNGSIYDYCRISVRNSLSQSQGLQTSASDPRVKNDLSSQLSENSKLDSVSLYLFTKAWDSENKLMSTSWQQHQNDHRLPLKMSNKVRAIYDSAKGRGRKLLQTMDDDDDESVVVSDIAVVSKDGSGNFTTINDAIAAAPNNTAATDGYFIILIAEGVYQEYVSIAKNKKFLMLIGEGINRTIITGDHNVVDGFTTFNSATFAVVAQGFVAMNITFRNTAGPSKHQAVAVRNGADMSTFYRCSFEGYQDTLYTHSLRQFYRECDIYGTVDFIFGNAAAVLQKCNMYPRLPMTGQFNAITAQGRTDPNQNTGISIQNATIKAAQDLAPVVATVETYLGRPWKEYSRTVYMQSFMDSLIAPAGWREWNGNFALSTLYYAEYDNTGPGSNTGNRVNWPGYHVIDATDAANFTVSNFLDGDAWLPQTTVPY 481
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed2g2241 481 ProSitePatterns Pectinesterase signature 2. 319 328 IPR033131 -
Aed2g2241 481 PANTHER PECTINESTERASE/PECTINESTERASE INHIBITOR 76 481 - -
Aed2g2241 481 MobiDBLite consensus disorder prediction 75 94 - -
Aed2g2241 481 PANTHER PECTINESTERASE/PECTINESTERASE INHIBITOR 15 76 - -
Aed2g2241 481 Gene3D - 167 481 IPR012334 -
Aed2g2241 481 PANTHER PECTINESTERASE 15 76 - -
Aed2g2241 481 Pfam Pectinesterase 173 471 IPR000070 GO:0030599|GO:0042545
Aed2g2241 481 PANTHER PECTINESTERASE 76 481 - -
Aed2g2241 481 SUPERFAMILY Pectin lyase-like 168 481 IPR011050 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed2g2241 Aed-Chr2 26024606 26026376 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed2g2241 6 76 Carbohydrate Esterase AT4G02330 38.889 1.89e-06 48.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed2g2241 K01051 - gmx:100792847 721.079