Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed2g2240 ATGGCTTTAAAGAACATGTCCAGAGTTTTTCTTGCTCTCTGTGTTTCCCTTGTGCTGTCCTTCTTGGCACCGATTTCCATAGCTGCTAACAACCGTGCAGTGGTTCCACCAGGAACCATTTGCAAGTCCACAGTAAACTCTTCCTTCTGCAAAACTGTGCTTGCTAATCAAAATGGCACCATCGTTGACTACGGTCGATTTTCTGTCCGAGAGTCACTGTCCCAGTCCCGCAAATTCTTAACCTCAGTAAACTCACTTCTTCAAGACAGATCCTCTCTGTCTCTCCCCACAATCCGCGCCCTCGAAGATTGTCAATTCCTCGCTGAGCTAGCCTTCGAATACTTATCAGACGCACTTGACGCCGTTGATAAAGCAAGCGATGTTCTTCCCACCGCTCAAGCCGAAGACCAGCTAACCCAGCTCAGCGCCGTTTTGACATGCGAAGAAACTTGTTTGGAAGGGTTGCAGATCACAGATCATGATCAAAGAGTGAAGACTGATCTAATCTCATCACTCTCTGACGATAAGAAGCTTCACAGTGTTTCCCTCGACTTGTTCACCAAAGGTTGGGTGCCCGAGAAGAAAATCATAACATCATGGCAAAACAATGGGAGAAATTTGGAGTTCAGCAATGGTCGTTTAACATTGAAGATGTCAGACCACGTACGTGCCATTTACGATTCCGCTAGAGGTCATCGGCACGGGAGAAAGCTACTCCAAGATAGCAGCGGAGGAGGAAGTGTGGTTGTAAGAGACATTGTGGTTGTTAGCCAGGATGGAAGCTGGAACTTCACCACTATCAACGCTGCTATATCAGCTGCCCCAAATAACACAGTTGCCAGTGGTGGCTACTTTCTCATTTTGGTCACTGAAGGTGTGTATCAAGAATATATATCCATAGCCAAAAACAAAAAGTACTTGATGATGATTGGAGATGGGATCAATCAAACCATTATCACCGGTAATCACAGTGTTTTCGACAACTTCACTACATTCGACTCAGCAACCTTTGCTGTGGTTGCACCAGGGTTCGTAGCGATTGACATAACATTCCGAAACACTGCTGGGCCAAGCAAGCACCAAGCAGTTGCAGTGAGAAACGGAGCTGATATGTCCACGTTCTACAGCTGCAGCTTTGAGGGTTATCAAGACACATTGTACACGCATTCTCTTAGACAGTTTTACCGCGAATGTGATATCTATGGCACTGTTGACTTCATATTTGGAAATGCTGCTGTTGTTTTCCAAACATGTAATCTGTATCCTCGCCTTCCCATGAGTGGACAATTTAATGCAATAACTGCACAAGGAAGAACGGACCCAAATCAAAACACAGGCACTTCCATACATAACACCACTATAAAAGCTGCTGCTGATTTGGCTCCTTCTGTTGGTACCGTGAAAACGTACCTTGGGAGACCATGGAAAGAGTACTCAAGAACGGTTTATATGCAGTCTTTCATGGATAGTTTCATAAATCCTGCTGGTTGGCATGATTGGAGTGGGGATTTTGCCCTAAGCACCTTGTACTATGCAGAGTATAATAACACGGGAAGTGGTTCAAACACCACACAACGAGTGACGTGGGCTGGTTATCATGTTATCAATGCTACTGATGCGGCTAATTTTACTGTGTCTAACTTCTTGGACGGAGGTAGTTGGCTGAATCAAACTGAAGTTCCATATACGCCTGGATTGATATAG 1704 0.4507 MALKNMSRVFLALCVSLVLSFLAPISIAANNRAVVPPGTICKSTVNSSFCKTVLANQNGTIVDYGRFSVRESLSQSRKFLTSVNSLLQDRSSLSLPTIRALEDCQFLAELAFEYLSDALDAVDKASDVLPTAQAEDQLTQLSAVLTCEETCLEGLQITDHDQRVKTDLISSLSDDKKLHSVSLDLFTKGWVPEKKIITSWQNNGRNLEFSNGRLTLKMSDHVRAIYDSARGHRHGRKLLQDSSGGGSVVVRDIVVVSQDGSWNFTTINAAISAAPNNTVASGGYFLILVTEGVYQEYISIAKNKKYLMMIGDGINQTIITGNHSVFDNFTTFDSATFAVVAPGFVAIDITFRNTAGPSKHQAVAVRNGADMSTFYSCSFEGYQDTLYTHSLRQFYRECDIYGTVDFIFGNAAVVFQTCNLYPRLPMSGQFNAITAQGRTDPNQNTGTSIHNTTIKAAADLAPSVGTVKTYLGRPWKEYSRTVYMQSFMDSFINPAGWHDWSGDFALSTLYYAEYNNTGSGSNTTQRVTWAGYHVINATDAANFTVSNFLDGGSWLNQTEVPYTPGLI 567
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed2g2240 567 Pfam Pectinesterase 254 551 IPR000070 GO:0030599|GO:0042545
Aed2g2240 567 Pfam Plant invertase/pectin methylesterase inhibitor 39 183 IPR006501 GO:0004857
Aed2g2240 567 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 39 188 IPR035513 -
Aed2g2240 567 Gene3D - 252 567 IPR012334 -
Aed2g2240 567 PANTHER PECTINESTERASE 20 563 - -
Aed2g2240 567 CDD PMEI-like_3 39 190 - -
Aed2g2240 567 SMART PMEI_2 32 185 IPR006501 GO:0004857
Aed2g2240 567 ProSitePatterns Pectinesterase signature 2. 400 409 IPR033131 -
Aed2g2240 567 PANTHER PECTINESTERASE/PECTINESTERASE INHIBITOR 20 563 - -
Aed2g2240 567 Gene3D Invertase/pectin methylesterase inhibitor family protein 38 188 IPR035513 -
Aed2g2240 567 SUPERFAMILY Pectin lyase-like 250 565 IPR011050 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed2g2240 Aed-Chr2 26020256 26022071 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed2g2240 7 567 Carbohydrate Esterase AT1G02810 58.348 0.0 656
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed2g2240 K01051 - gmx:100786124 948.732