Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed2g2239 ATGTATAATCACGTACCCACCTCCAATTCCATTCTCTCTGCGCTTTTTGTTCTACTCCTTTCTTCAGTAACCCATTTCAGCATCACCACCGCAAAAGCAACAAGAACCCTCCATTTCCAAGTCGCAAACTCCACATGCAAAGGAACACTCTACCCCGACCTCTGCGTCTCCACCCTTTCCTCCTTCCCAGATCTTACCTCAAAAACTGTTCCACAGATGATATGTTCTGTCGTGAACCACACCATATACGAGGTCACATTGTCGTCCTCCAACACCAGCAGCCTCCGAAAGAAGCTCCCCAAACTTAACAAACTCGAACAGATAGCCCTCGAGGACTGCATCAATCTCTTCGACAACACCATCGTGGAGCTCAACACCACCATCACGGATCTCTCGCAGAGCACGGTAGGGTCGAAGCGTTACCACGAATCGCAGACTCTGCTCAGCGCCGCCATGACTAACTTGTACACGTGTCTCGATGGCTTCGCGTACAGTAAGGGACACGTGAGGGACAGGATTGAGGAGGGGCTTTTGGAGATTTCGCATCACATTAGTAACTCGCTCGCCATGCTGAAGAAAATGCCCCAAGGAGGGAAGAAACCGTTCAAGAACGAGGTTTTCCCCGAATACGGTGAAGTGAAAAACGGGTTTCCAACATGGGTATCTCCCAAGGATAGAAAATTGCTTCAGGCTGCTGTGAATGAAACCAAGTTCAATCTTGTTGTGGCCAAAGATGGCACTGGCAACTTCACCACCATTGGAGAAGCAGTGACCGCGGCTCCAAACTCCAGCGCAACTAGGCAAATTTGTGATACACATAAAAGCCGGGGCATACTTCGAGAATGTGGAGGTAATCAAGAAGAAGATCAATCTGATGTTCGTGGGAGATGGAATTGGAAAGACTGTTGTGAAGGCTAG 918 0.4891 MYNHVPTSNSILSALFVLLLSSVTHFSITTAKATRTLHFQVANSTCKGTLYPDLCVSTLSSFPDLTSKTVPQMICSVVNHTIYEVTLSSSNTSSLRKKLPKLNKLEQIALEDCINLFDNTIVELNTTITDLSQSTVGSKRYHESQTLLSAAMTNLYTCLDGFAYSKGHVRDRIEEGLLEISHHISNSLAMLKKMPQGGKKPFKNEVFPEYGEVKNGFPTWVSPKDRKLLQAAVNETKFNLVVAKDGTGNFTTIGEAVTAAPNSSATRQICDTHKSRGILRECGGNQEEDQSDVRGRWNWKDCCEG 305
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed2g2239 305 Gene3D - 193 270 IPR012334 -
Aed2g2239 305 PANTHER PECTINESTERASE 17 269 - -
Aed2g2239 305 SUPERFAMILY Pectin lyase-like 237 268 IPR011050 -
Aed2g2239 305 TIGRFAM PME_inhib: pectinesterase inhibitor domain 9 194 IPR006501 GO:0004857
Aed2g2239 305 PANTHER PECTINESTERASE 17 269 - -
Aed2g2239 305 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 43 195 IPR035513 -
Aed2g2239 305 Gene3D Invertase/pectin methylesterase inhibitor family protein 40 192 IPR035513 -
Aed2g2239 305 SMART PMEI_2 37 190 IPR006501 GO:0004857
Aed2g2239 305 Pfam Plant invertase/pectin methylesterase inhibitor 43 190 IPR006501 GO:0004857
Aed2g2239 305 CDD PMEI-like_3 44 195 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed2g2239 Aed-Chr2 26014833 26015885 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed2g2239 66 269 Carbohydrate Esterase AT4G02320 44.749 8.26e-46 160
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed2g2239 K01051 - gmx:100813592 408.297