Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed2g2238 ATGTATCAAGCCTTCCAATTAACAGAGTACATTTTGGCTGACAGATGGAGTTCATACTCCAAACTGCTCCACGTACCTGTGGTTGGAGACGGATTCATCGCAAAGGGTATAACCTTCGAGAACTCAGCTGGGCCCAGCAAACACCAAGCCGTGGCTCTAAGGAGCGGCGCTGATCTCTCCGCCTTCTACAAATGCAGCTTCGTCGGCTACCAAGACACTCTCTACGTCCACTCCTTACGTCAATTCTACCGCGACTGCGACATTTACGGCACCGTTGACTTCATCTTCGGCAACGCAGCAGCAGTGCTCCAAAACTGCAACCTTTACGCGCGCAAGCCCAACGAAAACCAAAAGAACCTCTTCACCGCACAGGGCAGAGAGGACCCTAACCAGAACACAGGCATTTCCATCCTGAACTGCAAGGTTGCAGCCGCAGCTGATTTGATCCCGGTCAAGTCTCAGTTCAAGAGTTACTTGGGTCGTCCTTGGAAATTGTACTCGAGGACCGTTTATCTGAACTCTTACATGGAGGATCTTATTGAACCCATTGGGTGGTTGGAATGGGATGGCACGTTTGCATTGGATACACTTTACTATGGAGAGTATAACAATAAGGGTCCCGGTTCAAATACGAGTGCTAGAGTTACGTGGCCTGGTTATAGGGTTATTAAGAACGCCACTGAGGCAAGCCAGTTCACAGTTCGCAATTTCATTCAAGGCAATCAATGGCTTAACTCCACCGACATTCCCTTCTTCTCTGATTTGAGTTGA 771 0.489 MYQAFQLTEYILADRWSSYSKLLHVPVVGDGFIAKGITFENSAGPSKHQAVALRSGADLSAFYKCSFVGYQDTLYVHSLRQFYRDCDIYGTVDFIFGNAAAVLQNCNLYARKPNENQKNLFTAQGREDPNQNTGISILNCKVAAAADLIPVKSQFKSYLGRPWKLYSRTVYLNSYMEDLIEPIGWLEWDGTFALDTLYYGEYNNKGPGSNTSARVTWPGYRVIKNATEASQFTVRNFIQGNQWLNSTDIPFFSDLS 256
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed2g2238 256 Gene3D - 12 255 IPR012334 -
Aed2g2238 256 PANTHER PECTINESTERASE 13 253 - -
Aed2g2238 256 SUPERFAMILY Pectin lyase-like 24 253 IPR011050 -
Aed2g2238 256 Pfam Pectinesterase 25 241 IPR000070 GO:0030599|GO:0042545
Aed2g2238 256 ProSitePatterns Pectinesterase signature 2. 88 97 IPR033131 -
Aed2g2238 256 PANTHER PECTINESTERASE 13 253 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed2g2238 Aed-Chr2 26012688 26013803 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed2g2238 13 255 Carbohydrate Esterase AT4G02320 62.963 1.29e-114 337
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed2g2238 K01051 - gmx:100813592 458.759