Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed2g2230 ATGTCCGGCACAGTCGAGTCCAACGGTGCCGTTTGTTATTATTCGATGCTTGGGATTGGCAAACATTCCACCGATGACGAAATTCGATGCGCTTATCGAAAGATGGCTCTGAAGTGGCATCCTGATCGGTGGATCAAGGACCCAAAGCTTGCGCTAGAAGCCAAAAACCGATTTCAGCGCGTTCAAGAGGCTTATTCAGTTTTGTCCAATAAAGGGAAGAAAAAAATATATGATGCTGGCTTGTTTGGTCTGATTGAAGAGGACGATGATGAGGGATTTGTTGATTTCATGCAAGAAATGGCCCTGATGATGCAGAAAGTGAGACCCAAGGATGAGAAATGCATGTTGGAGGATCTTCACGGGTTGTTAATCGATATGATGGCAGATAATGAAGAGATTGGAAAGTCTGGGTCAAGCTGGAATTCATCTCCATGTCCTACAAAAAGTACACGTATCTTATGA 462 0.4394 MSGTVESNGAVCYYSMLGIGKHSTDDEIRCAYRKMALKWHPDRWIKDPKLALEAKNRFQRVQEAYSVLSNKGKKKIYDAGLFGLIEEDDDEGFVDFMQEMALMMQKVRPKDEKCMLEDLHGLLIDMMADNEEIGKSGSSWNSSPCPTKSTRIL 153
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed2g2230 153 ProSiteProfiles dnaJ domain profile. 12 81 IPR001623 -
Aed2g2230 153 Gene3D DnaJ domain 3 96 IPR036869 -
Aed2g2230 153 PRINTS DnaJ domain signature 53 73 IPR001623 -
Aed2g2230 153 PRINTS DnaJ domain signature 32 47 IPR001623 -
Aed2g2230 153 PRINTS DnaJ domain signature 14 32 IPR001623 -
Aed2g2230 153 ProSitePatterns Nt-dnaJ domain signature. 58 77 IPR018253 -
Aed2g2230 153 Pfam DnaJ domain 13 78 IPR001623 -
Aed2g2230 153 PANTHER PUTATIVE, EXPRESSED-RELATED 5 152 - -
Aed2g2230 153 MobiDBLite consensus disorder prediction 134 153 - -
Aed2g2230 153 PANTHER DNAJ HOMOLOG SUBFAMILY B MEMBER 6-LIKE 5 152 - -
Aed2g2230 153 SMART dnaj_3 11 73 IPR001623 -
Aed2g2230 153 SUPERFAMILY Chaperone J-domain 10 99 IPR036869 -
Aed2g2230 153 CDD DnaJ 12 70 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed2g2230 Aed-Chr2 25957424 25958295 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed2g2230 12 79 C2H2 Transcription Factor Family AT1G74250 44.928 3.49e-13 63.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed2g2230 - - gmx:100794942 275.404