Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed2g2216 ATGGTATCTGCACGAGAGAACAATAACAACAACGTTAGAGAGGCTTGCAGTGTGACAAGGTTCCAAAGCGTCTGTGCTAAGACGCTAGCAGGATTCTCCGACACCGCAGGAACAAGCCCAAGCAAGTGGGCACGTGCGGGAGTGTCGGTGTCAATAGGCGAGGTCAAGAAGGTTCACAAATATCTACAAAAGCTGAAGAGTAACGGAGATTTGAAGAACGGAAGAAACGGAGTTGCGCTTTCAGATTGTGTTGAGACATTTTCCTATGCCCTTGATGAGCTTCACAAATCGCTTGGCGTGCTTAGGAACCTAAGCAAAAGCACGTTCAGCACCCAAATGGGGGACCTTAACACGTGGATCAGTGCAGCACTCAGCGATGAAGAGACTTGCCTCGACGGGTTTCAAAGCCATGATCAAGTTAAGTTGATACGAAAGCGGGTTCAGTACGCGTCTTACATCACCAGTAACGCACTTGCTCTTGCCAACAAACTCGCCACTACAGGTCTCAGATCAATCATCAATCATGATCCATAG 534 0.4813 MVSARENNNNNVREACSVTRFQSVCAKTLAGFSDTAGTSPSKWARAGVSVSIGEVKKVHKYLQKLKSNGDLKNGRNGVALSDCVETFSYALDELHKSLGVLRNLSKSTFSTQMGDLNTWISAALSDEETCLDGFQSHDQVKLIRKRVQYASYITSNALALANKLATTGLRSIINHDP 177
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed2g2216 177 Pfam Plant invertase/pectin methylesterase inhibitor 11 160 IPR006501 GO:0004857
Aed2g2216 177 TIGRFAM PME_inhib: pectinesterase inhibitor domain 5 164 IPR006501 GO:0004857
Aed2g2216 177 CDD PMEI-like_3 15 166 - -
Aed2g2216 177 Gene3D Invertase/pectin methylesterase inhibitor family protein 7 166 IPR035513 -
Aed2g2216 177 PANTHER PECTINESTERASE INHIBITOR-LIKE 5 159 - -
Aed2g2216 177 SMART PMEI_2 7 160 IPR006501 GO:0004857
Aed2g2216 177 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 10 164 IPR035513 -
Aed2g2216 177 PANTHER PLANT INVERTASE/PECTIN METHYLESTERASE INHIBITOR SUPERFAMILY PROTEIN 5 159 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed2g2216 Aed-Chr2 25882840 25883373 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed2g2216 12 169 Carbohydrate Esterase AT3G14310 32.515 7.23e-19 81.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed2g2216 - - gmx:100791264 231.876
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed2g2216 2 25882840 25883373 Aed2g2216 2 25882840 25883373 ECH