Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed2g2214 ATGACTACAGTACTAGTTAAAAAGATAAGAATCACGTGTGACGCGCACAGCGTAAGAGCGTGCGGGGCTGGGCATTGTCTCTGGAAGAAAATGAGTAGACGCTCGAGCAGAACTGTATACGTTGGGAATCTACCTGGTGATATCCGCGAAAGAGAAGTTGAAGATTTGTTTCTGAAGTATGGACACATAACACACATTGACCTAAAGGTTCCCCCGAGACCACCTGGTTATGCATTTGTAGAGTTTGAAGATGCTCAAGATGCTGAGGATGCAATTCGTGGCCGTGATGGCTATGATTTTGATGGGCACCGGTTACGGGTGGAGCCTGCCCATGGTGGACGTGGTCATTCATCCTCAAGAGATCGACACAGTAGTCACAGCAATGGCCGAGGTGGACGTGGGGTATCTAGGCGCTCTGAATATCGTGTTCTAGTCACTGGATTGCCCTCTTCGGCATCCTGGCAGGATCTTAAGGATCACATGCGTAAGGCAGGGGATGTTTGCTTTTCTCAAGTTTTTCATGATGGAAGGGGTACTACTGGTATTGTGGATTACACAAATTACGATGATATGAAATATGCTATCAAGAAGCTTGATGACTCTGAGTTCCGGAATGCATTTTCCAAGGGATTTGTTCGGGTGAGGGAATATGATTCAAGGAGGGATTCCTCTAGAAGTCCAAGCCGTGGCCCATCTCATTCTAGAGGAAGAAGCTATAGCCGCAGTCGTAGCCGTAGCCGTAGTTACAGTCGGGACCGGAGCCAAAGCAAATCTCCAAAGGGTAAATCTACACAGCGTTCACCTGCTAAATCTCCATCAAAATCCCCTTCTCTTTCTCACTCAAGATCAAGGTCCCGTTCATTATCAGGATCACGGTCCAGATCCAGGTCTCCATTGCCTCCGCGTAATAAAAGCCCCAAAAGACGCAGTGCTAGCAAGAGTAAGAGTCCGAGTAGGAGCAGGAGCAAGAGTTTGTCTCGGTGA 984 0.4797 MTTVLVKKIRITCDAHSVRACGAGHCLWKKMSRRSSRTVYVGNLPGDIREREVEDLFLKYGHITHIDLKVPPRPPGYAFVEFEDAQDAEDAIRGRDGYDFDGHRLRVEPAHGGRGHSSSRDRHSSHSNGRGGRGVSRRSEYRVLVTGLPSSASWQDLKDHMRKAGDVCFSQVFHDGRGTTGIVDYTNYDDMKYAIKKLDDSEFRNAFSKGFVRVREYDSRRDSSRSPSRGPSHSRGRSYSRSRSRSRSYSRDRSQSKSPKGKSTQRSPAKSPSKSPSLSHSRSRSRSLSGSRSRSRSPLPPRNKSPKRRSASKSKSPSRSRSKSLSR 327
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed2g2214 327 MobiDBLite consensus disorder prediction 260 300 - -
Aed2g2214 327 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 141 219 IPR000504 GO:0003723
Aed2g2214 327 SUPERFAMILY RNA-binding domain, RBD 35 205 IPR035979 GO:0003676
Aed2g2214 327 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 37 112 IPR000504 GO:0003723
Aed2g2214 327 CDD RRM2_SF2_plant_like 141 216 - -
Aed2g2214 327 MobiDBLite consensus disorder prediction 216 327 - -
Aed2g2214 327 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 39 106 IPR000504 GO:0003723
Aed2g2214 327 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 143 205 IPR000504 GO:0003723
Aed2g2214 327 PANTHER PRE-MRNA-SPLICING FACTOR SF2-LIKE PROTEIN 33 320 - -
Aed2g2214 327 CDD RRM1_SF2_plant_like 38 108 - -
Aed2g2214 327 MobiDBLite consensus disorder prediction 301 316 - -
Aed2g2214 327 MobiDBLite consensus disorder prediction 103 137 - -
Aed2g2214 327 Gene3D - 28 140 IPR012677 -
Aed2g2214 327 PANTHER SERINE/ARGININE RICH SPLICING FACTOR 33 320 - -
Aed2g2214 327 Gene3D - 141 217 IPR012677 -
Aed2g2214 327 MobiDBLite consensus disorder prediction 103 140 - -
Aed2g2214 327 MobiDBLite consensus disorder prediction 245 259 - -
Aed2g2214 327 SMART rrm1_1 142 215 IPR000504 GO:0003723
Aed2g2214 327 SMART rrm1_1 38 108 IPR000504 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed2g2214 Aed-Chr2 25870364 25875180 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed2g2214 32 225 Eukaryotic Initiation Factors Gene Family AT4G34110 25.123 3.03e-06 47.0
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed2g2214 2 25870364 25875180 Aed2g2214 2 25870364 25875180 ECH