Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed2g2209 ATGAAGTTTGCTCACACAAACATGTCCTTCGCATCTTCAGCTTGCTTAACATCATTCTCATGCGCATTTCCTGAGAAAAAAACCTCAGGGGACACGTTCATCTCAACTCTGCTTCAATGGCTAGAGTTTATTTTCCTCTCACCTTGTCCTCAAAGAGCTATATTGTCTTTCGTCGATGTCGTGCTCCTCTTGTTTCTCTTCGTCTTTGCTGTCACCAAGCTCTGGAAAAAGTCCACCTTCAATGTCGCTTCCTCAACCGACCTTAACAAACCACTCATCACAAACAACAGACCCATTTTCTCAACAACTACGCAGTTTAAGCTAACCTTAACTGTAGCGGTTGTTTTGACTGTACTCTACACTGTTGCTTACGTTCTTGCGTTTAGCAGTTCCTCTGAGGTACCGTGGAAGCAAGTTGACGAGGTGTTTTGGTTAGTCCAGGCCATAACACATGCGGGGATTGCAGTCTTTATCGTCCACGAGAAAAGATTTAAAGCTGTTACACACCCTGTTTCGGTTCGAGTTTATTGGATTGCGAATTTCATTGTTATGTCTCTGTTCACTGTTTCTGCGGTTATACGTTTGGTCTCCGTTGTGGACGTGGATGGAACCAAGGTGGACGAGGTGGTCTCTTTCATTTCATTCCCTCTGTCGTTATTTCTTGCTTTCGTGGCGGTTAAGGGATCCACTGGCATTGTTTTGTCAGAAGAAAGTCAAGAAACACAACTGAGTGAATCCGAGGTTACTGGCTATGCCTCAGCTTCTCTGTTATCCAAGGCGTTTTGGTTCTGGATAAACCCCTTGTTGCGTAAAGGGTACAAGTCCGCGCTGAAGCTTGATGAGATTCCAACGCTTTCTCCAGAGCACAGAGCTGAGAGAATGTCAACTATTTTTGAATCAAAATGGCCTAAATCAAACGAGAGGTCGAAGCATCCGGTTAGCATCACTTTGCTTCGGTGCTTTTGGAAGGAGTTAGCCTTCACTGCCTTCCTTGCAATCATTAGGCTCTGCGTCATGTTTGTGGGGCCGGTTCTCATACAGAGTTTTATTGATTACACATCAGGGAAGAGAACCTCCGTATACGAAGGATACTACCTCGTGTTGGTTCTTCTTATTTCAAAGTTCATTGAAGTGTTGAGTATTCATCATTTCAACTTCCAAGCTCAGAAGGTTGGGATGCTTATAAGGTGCACGCTTATCCCTTCTTTGTATAGGAAGGGACTAAAGCTATCGTTCTCTGCTCGGCAGGATCACGGGGTTGGGACCATTGTGAATTACATGGCCGTTGATACACAGCAACTCTCTGACATGATGCTTCTGTTAAATTCTGTGTGGACAACGCCACTTCAAGTTGTCATTGGTCTTGTTCTGCTTTACAATTGTTTAGGTGCCTCAGTGGTCACGGCGTTTCTTGGTCTTCTTGGTGTTTTTTTCTATTCTGTGATTGGTAACCGTAGGAACAACAACTTCCAACACAATGTGATGATCAACCGCGACTCCAGAATGAAAGCTGTGAATGAGATGCTTAATTACATGCGTGTCATCAAGTTCCAGGCCTGGGAGGAGCATTTCAACCAGAGAATTATGGGATTCCGCGAGACCGAGTATGTGTGGCTCTCCAAGTTGATGTTCTCAATTTGTGGCACTATTGTTATGATGTGGAGCACGCCTTTGTTGGTGTCAACTCTCACATTTGGTACTGCTATTTTGCTGGGAGTTCAACTTGATGCGGCCACGGTCTTCACCACAACAACTGTGTTCAAGATATTGCAAGAGCCTATTCGGACATTCCCACAGTCTATGATATCGCTCTCACAAGCAATGATATCACTGGAGAGGTTAGACAAGTTCATGTCGAGCAGGGAATTGTTGGATGATTCAGTCGAGAGAGCAGAAGGCTGTGCTGGACAAACAGCAGTGGAAATCATAGATGGGACTTTTAGTTGGGATGATGATAACACGCAGCAGGACTTGAAAAATATTAACTTGGAGATCAATAAGGGGGAGCTTACAGCAATTGTTGGGACTGTAGGGTCAGGAAAGTCATCTCTCCTTGCATCAATTCTTGGAGAGATGTGCAGGATTTCTGGAAAGGTTCGGGTTTGTGGGAGTGTTGCTTATGTTGCACAAACATCTTGGATTCAGAATGGAACTATTGAAGAAAACATTCTCTTTAGTTTACCAATGAACAGACAGAGGTACAATGAAGCTATAAGGGTTTGTTGTTTGGAGAAAGATTTGGAAATGATGGATGATGGGGATCAGACAGAAATTGGAGAGCGTGGTATCAATCTGAGTGGAGGCCAGAAGCAGCGTATACAACTTGCCAGGGCTGTATATCAAGACTCTGATGTATATCTTCTTGATGATGTCTTCAGTGCTGTTGATGCTCATACTGGTTCTGAAATATTTAAGGTGATGAGGGATGGTATGATAGTCCAATCAGGGAAGTACGATAATCTATTAGATTCTGGAATGGATTTCAAAGCTCTGGTAGTTGCACATGAGACCTCCATGGAACTAGTAGAGCAGGGTCAGGGTGTGGTCATGCCTGGTGAAATTTCTAACAAACCAACAAAATCTTCAGAGGCAATTTCAATTTACAAAGGAACCAATGGTGAAAGCAATTCTCTTGAGCAGCCCAAGTCTAGCAAGAAAAGTTCTAAACTCATCAATGAAGAGGAGAGAGCAACTGGCAAAGTGAGCTTACATATGTATAAACTCTATTGCACTGAGGCTTTCGGATGGTGGGGCATTACAATAGTATTGTTTTTTTCTTTGTTATGGCAAGCGTCTCTGATGGCAAGTGATTATTGGCTGGCATATGAAACTGCAGAAGAACGTGCTCAAATGTTTAACCCTTCTATGTTCTTGTCCATCTATGCTATTATAACTGTTGTTTCAGTTATTTTGGTAGTGATAAGATCATACTTCTTTACACTCTTGGGGCTAAAGACAGCTCAAATTTTCTTCACACAAATTGTTCGTAGCATCTTGCATGCGCCCATGTCTTTCTTTGACACTACGCCATCTGGGAGAATTCTAAGTAGGGCATCCACTGATCAGACCAATGTTGATGTCCCTCTCCCCATGTACATGGGAATTGTTATTGCCATGTATATTACAGTGCTCAGCGTCTTCATCATCACCTGTCAATATTCTTGGCCAACAGTGTTTTTGATAATTCCTCTTGTTTGGTTGAATATTTGGTACCGGGGTTACTTTATTGTATCGTCTCGGGAATTAACTCGCCTGGATTCAATTACCAAAGCACCAGTTATTCATTACTTCTCTGAAAGCATTGCAGGGGTGATGACAATTCGTGCATTCAGAAAGCAAAGGAATTTTTGTGAAGAAAATCTCAAACGTGTGAATGCTAATTTGCGGATGGATTTCCACAACTATAGTTCTAATGAGTGGTTGGGATTTCGCGTAGAATTGTTTGGAAGCTTTATCTTTTGCGTTTCTGCCATGTTCATGATCATCTTACCCAGCAGTATCATAAAGCCAGAAAATGTTGGTTTATCTCTCTCTTATGGGTTAACCTTAAATAGTCTCTTGTTCTGGGCTGTGTACATGACTTGTTTCATCGAAAATAAAATGGTGTCTGTTGAGAGGATAAAACAGTTCACAAATATTCCATCGGAACCAGCATGGAATATCAAGGATTATCTTCCTCCTTCAAATTGGCCAGGCCAAGGCAATGTAGATATCAAAGACTTGCAGGTCAGATATCGATCAAACACTCCATTGGTTCTCAAAGGCATTACTTTAAGCATTAATGGAGGTGAAAAGGTTGGTGTTGTTGGTCGAACTGGGAGTGGAAAATCAACTTTGATTCAAGTATTCTTCAGGCTGGTGGAACCTTCCGGAGGGAAAATAGTAATCGATAGTATTGACATATCAGCGTTGGGGCTTCATGATCTTAGATCACGGTTTGGTATCATTCCTCAGGAGCCTGTCCTTTTTGAAGGAACCGTCAGAAGCAACATCGATCCAACTGGACAATATACAGATGAAGAGATATGGAAGAGCTTGGAACGGTGTCAGTTAAAAGAGGTTGTTGCTGCCAAGCCTGAAAAACTTGAGCATTTAGTGGCGGATAATAGAGAGAATTGGAGTGTGGGGCAGAGACAGTTGCTTTGTCTAGGGAGGGTTATACTAAAGAGAAGCCGGCTGTTGTTTATGGATGAGGCAACTGCTTCTGTTGATTCCCAAACCGATGGTGTAATTCAGAAGATCATTAGAGAGGACTTTGCAGACTGTACCATCATCAGCATTGCTCACAGAATACCCACAAGGCAATCTCTCTTTGGGGCACTGGTTCAAGAGTATGCCAATCGCTCCACTGGACTATAA 4359 0.4274 MKFAHTNMSFASSACLTSFSCAFPEKKTSGDTFISTLLQWLEFIFLSPCPQRAILSFVDVVLLLFLFVFAVTKLWKKSTFNVASSTDLNKPLITNNRPIFSTTTQFKLTLTVAVVLTVLYTVAYVLAFSSSSEVPWKQVDEVFWLVQAITHAGIAVFIVHEKRFKAVTHPVSVRVYWIANFIVMSLFTVSAVIRLVSVVDVDGTKVDEVVSFISFPLSLFLAFVAVKGSTGIVLSEESQETQLSESEVTGYASASLLSKAFWFWINPLLRKGYKSALKLDEIPTLSPEHRAERMSTIFESKWPKSNERSKHPVSITLLRCFWKELAFTAFLAIIRLCVMFVGPVLIQSFIDYTSGKRTSVYEGYYLVLVLLISKFIEVLSIHHFNFQAQKVGMLIRCTLIPSLYRKGLKLSFSARQDHGVGTIVNYMAVDTQQLSDMMLLLNSVWTTPLQVVIGLVLLYNCLGASVVTAFLGLLGVFFYSVIGNRRNNNFQHNVMINRDSRMKAVNEMLNYMRVIKFQAWEEHFNQRIMGFRETEYVWLSKLMFSICGTIVMMWSTPLLVSTLTFGTAILLGVQLDAATVFTTTTVFKILQEPIRTFPQSMISLSQAMISLERLDKFMSSRELLDDSVERAEGCAGQTAVEIIDGTFSWDDDNTQQDLKNINLEINKGELTAIVGTVGSGKSSLLASILGEMCRISGKVRVCGSVAYVAQTSWIQNGTIEENILFSLPMNRQRYNEAIRVCCLEKDLEMMDDGDQTEIGERGINLSGGQKQRIQLARAVYQDSDVYLLDDVFSAVDAHTGSEIFKVMRDGMIVQSGKYDNLLDSGMDFKALVVAHETSMELVEQGQGVVMPGEISNKPTKSSEAISIYKGTNGESNSLEQPKSSKKSSKLINEEERATGKVSLHMYKLYCTEAFGWWGITIVLFFSLLWQASLMASDYWLAYETAEERAQMFNPSMFLSIYAIITVVSVILVVIRSYFFTLLGLKTAQIFFTQIVRSILHAPMSFFDTTPSGRILSRASTDQTNVDVPLPMYMGIVIAMYITVLSVFIITCQYSWPTVFLIIPLVWLNIWYRGYFIVSSRELTRLDSITKAPVIHYFSESIAGVMTIRAFRKQRNFCEENLKRVNANLRMDFHNYSSNEWLGFRVELFGSFIFCVSAMFMIILPSSIIKPENVGLSLSYGLTLNSLLFWAVYMTCFIENKMVSVERIKQFTNIPSEPAWNIKDYLPPSNWPGQGNVDIKDLQVRYRSNTPLVLKGITLSINGGEKVGVVGRTGSGKSTLIQVFFRLVEPSGGKIVIDSIDISALGLHDLRSRFGIIPQEPVLFEGTVRSNIDPTGQYTDEEIWKSLERCQLKEVVAAKPEKLEHLVADNRENWSVGQRQLLCLGRVILKRSRLLFMDEATASVDSQTDGVIQKIIREDFADCTIISIAHRIPTRQSLFGALVQEYANRSTGL 1452
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed2g2209 1452 Coils Coil 1107 1127 - -
Aed2g2209 1452 Pfam ABC transporter 1253 1401 IPR003439 GO:0005524
Aed2g2209 1452 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 921 1199 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Aed2g2209 1452 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 638 831 IPR027417 -
Aed2g2209 1452 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 15 - -
Aed2g2209 1452 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 98 1433 - -
Aed2g2209 1452 CDD ABC_6TM_ABCC_D1 327 614 IPR044746 GO:0140359
Aed2g2209 1452 ProSitePatterns ABC transporters family signature. 765 779 IPR017871 GO:0005524
Aed2g2209 1452 Gene3D ABC transporter type 1, transmembrane domain 882 1217 IPR036640 GO:0005524|GO:0016021
Aed2g2209 1452 Gene3D - 617 850 IPR027417 -
Aed2g2209 1452 SUPERFAMILY ABC transporter transmembrane region 316 619 IPR036640 GO:0005524|GO:0016021
Aed2g2209 1452 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 640 894 IPR003439 GO:0005524
Aed2g2209 1452 MobiDBLite consensus disorder prediction 871 891 - -
Aed2g2209 1452 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 326 606 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Aed2g2209 1452 SMART AAA_5 1262 1450 IPR003593 -
Aed2g2209 1452 SMART AAA_5 667 871 IPR003593 -
Aed2g2209 1452 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1236 1450 IPR003439 GO:0005524
Aed2g2209 1452 Pfam ABC transporter transmembrane region 327 593 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Aed2g2209 1452 Pfam ABC transporter transmembrane region 921 1177 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Aed2g2209 1452 PANTHER ABC TRANSPORTER C FAMILY MEMBER 4 98 1433 - -
Aed2g2209 1452 CDD ABC_6TM_ABCC_D2 919 1211 IPR044726 GO:0140359
Aed2g2209 1452 MobiDBLite consensus disorder prediction 871 885 - -
Aed2g2209 1452 Gene3D - 1220 1442 IPR027417 -
Aed2g2209 1452 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1229 1434 IPR027417 -
Aed2g2209 1452 CDD ABCC_MRP_domain2 1234 1433 - -
Aed2g2209 1452 Pfam ABC transporter 658 791 IPR003439 GO:0005524
Aed2g2209 1452 Gene3D ABC transporter type 1, transmembrane domain 314 616 IPR036640 GO:0005524|GO:0016021
Aed2g2209 1452 CDD ABCC_MRP_domain1 640 805 - -
Aed2g2209 1452 SUPERFAMILY ABC transporter transmembrane region 916 1216 IPR036640 GO:0005524|GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed2g2209 Aed-Chr2 25849239 25855199 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed2g2209 596 827 Calmodulin-binding Proteins AT2G36910 26.545 5.48e-16 82.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed2g2209 - K05666 gmx:100808752 2355.87