Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed2g2208 ATGCAACACGAGGTGTTAAATAGTCAATATTTTATTGCATACCTCTGGTTCTATGAGGTGGATGAAATAGCAGAGTGCAATAGACACTACACTACGTGGGAGCAAATTAAGTTGAAGGTGAAGTTTCTCGAGTCGGGGGGGCGCGCACACACGCGCAAAAACATGTCCTTAGCATCTTCAACTTGGATAACATCCCTCTCATGTTCATTTCCTGAGAGACAAGCCTCAGGGGACACGTTCATCGCAGCTCTGCCTCAATGGCTCAGATTTATTTTCCTCTCACCTTGTCCTCAGAGAGCTATGTTGTCTTTCGTCGATGTCGTGCTCCTCTTGTTTCTCTTCGTCTTTGCTGTTACCAAGCTCTGGAGAAGGTTCACTTTCACATCCCATGGCGGTTCCCCCACCAACCTCGACGAACCACTCATCAGAAATAACAGATCCATTTTCTTAACAACTATGTGGTTTAAGCTAACCTTAGCTGTGGTAATTGTGTTGACTACACTTTACACGGTTGGTAGCGTTCTTGCTTTTAGCAGCTCCTCCGAGGTGCCGTGGAAGCAAGTTGATGAGGTGTTTTGGTTAGTCCAGGCCATAACACACGCGGTGCTTGTCGTCTTAATCATTCACGAGAGAAGATTTAAAGCTCTTACGCACCCTCTGTCGGTTAGAGTTTACTGGATTGCGAATTTCTTTGTTATTTCGCTGTTAACTGTTTCCGCGATTATACGTTTGGTCTCGGTGGACGTGGATGGGACCATAAGCAGCTTCAAGGTGGATGACGTGGTCGCTTTCATTTCACTCCCTCTGTCGTTATTTCTTCTTTTTGTCGCGGTTAAAGGATCCACCGGCATTGTTTTTCCGACAGAGGAAACACAGGCACTTGTTGATGAGGAAACTGAGTTATACGATGGTGGTGAGACGAAATCCGACGTTACTGGCTTCGCTTCAGCTTCTATATCGTCCAAGTTATTTTTGACTTGGATAAACCCCTTGTTGCGTAAAGGGTACGAGTCCGCGCTGAAGATCGATGAGATTCCAACACTTTCTTCGGAGTTTAGAGCTGAGAGTCTGTCATCTATTTTTGAAACAAAGTGGCCTAAATCAAACGAGAGGTCGAAGCATCCGGTTAGCATCACTTTGCTTCGGTGCTTTTGGAAGCAGTTAGCCTTCAATGCCTTTCTTGCAATTATTAGACTCTGTGTAATGTTTGTGGGGCCGGTTCTCATACAGAGTTTTATTGATTACACATCAGGGAAGAGAACCTCTGTATACGAAGGATACTACCTCGTGTTGATTCTTCTAGTTGCAAAGTTCATTGAAGTGTTGGCCACTCATCATTCAAACTATGAAGCTCAGAAGATTGGGACGCTTTTACGGTCCACTCTTATCCCTTCTTTGTATAAAAAGGGGTTAATGCTATCATTCTCTGCTCGCCAGGATCATGGAGTAGGGACCATTGTGAATTACATGGCTGTTGATACCCAGCAACTCTCTGACATGATGATGCAGTTAAATGCTGTGTGGACAACGCCACTTCAAGTTGTCATTGGCTTGTTTCTGCTTTACAATGGTCTAGGTGCCTCAACGGTCTCGGCGTTTCTTGGTCTTCTTTGTGTTTTAGTGTTTGCTGTGATTGGTACCCGTAGGAACAATCGCTTCCAATATAGTGTGATGAGGAACCGTGACTCCAGGATGAAAGCTGTGAATGAGATGCTTAATTACATGCGTGTCATCAAGTTCCAGGCCTGGGAGGAGCATTTCAACCAGAGAATTATGGGATTCCGTGAGACCGAGTATGGCTGGCTATCCAAGTTGATGTTCACAATTTGTGGCAACATTGTTGTGATGTGGAGCACGCCGCTGTTGGTGTCAACTCTCACATTTGGTACTGCTGTTTTGCTGGGAGTTCAACTTGATGCGGCCACGGTCTTCACCACAACAACTGTGTTCAAGATACTGCAGGAGCCTATTAGGACATTCCCACAGTCTATGATAGCTCTCTCACAAGCAATGATATCACTGGAGAGGTTGAACAAGTTCATGTCAAGCAGGGAATTGTTGGATGATTCAGTTGAGAGAGCAGAAGGCTGTGCTGGACAAACCGCAGTGGAAATCATTGATGGGACTTTTAGTTGGGATGATGATAACATGCAGCAGGACTTGAAAAATATTAACTTGGCGATTAAAAAGGGAGAGCTTACAGCAATTGTTGGGACTGTAGGGTCAGGCAAGTCCTCTCTCCTCGCATCAATTCTTGGAGAGATGCGTAAGATTTCTGGAAAGGTTCGTGTTTGTGGGAGTGTTGCCTATGTTGCACAAACATCTTGGATTCAGAATGGGACCATTGAAGAAAACATTCTCTTTGGTTTACCAATGGATAGACGGAAGTACAGTGAAGTTATCAGGGTGTGTTGTTTGGAAAAAGATTTGGAAATGATGGATTATGGGGATCAGACGGAAATTGGAGAACGTGGTATCAACTTGAGTGGAGGCCAGAAGCAGCGTATACAACTTGCCAGGGCTGTTTATCAAGACTGTGATATATATCTTCTTGATGATGTCTTTAGTGCTGTTGATGCTCATACTGGTTCTGAAATATTTAAGGAATGCGTGCGGGGAGCTCTAAAAGGCAAGACCATTATTCTTGTAACACACCAAGTAGACTTCCTACATAATGTGGATCAAATATTAGTGACAAGGGACGGTAATGTAGTCCAATCGGGGAAGTACGATGATTTATTAGATTCTGGAATGGATTTTAAAGCTCTGGTAGTTGCACATGATACCTCCATGGAACTAGTAGAGCAGGGTCAGGTTGAGGTCATGCCTAGTGAAAATTTGAACAAACCAATGAAATCTCCAGAGGCAAAAAATTCTGGTGAAAGCAATTCTCTTGACCGGCCTGCAGGGTCAAGCAAGAAAAGTTCAAAACTCATCAAAGAAGAAGAGAGGGAAACCGGCAAAGTGAACTTAAATATCTATAAAATCTACTGCACTGAGGCTTTTGGGTGGTGGGGCATTACAGTAGTAGTGGTTCTTACTTTGTTATGGCAAGCATCTATGATGGCAAGTGATTACTGGCTGGCATATGAAACCTCAGAAGAACGTGCTCAAGTGTTTAACCCTTCTATGTTCATTTCCATCTATGCAATTATTACTGTTGTTTCAGTTATTTTGGTAGTGATAAGATCATACTTCTTTACACTCTTGGGGCTGAAGACAGCTCAAATTTTCTTCACACAAATTCTTCGTAGCATCTTGCATGCACCCATGTCTTTCTTCGACACTACGCCATCTGGGAGAATTCTAAGTAGGGCATCCACTGATCAGTCAAATGTTGATATCATTCTCCCCTTGTTCATGGGAATAGTTATTGCCATGTACATTACAGTGCTCAGCATCTTGATCATCACCTGTCAAAATTCTTGGCCAACAGTGTTTTTGATAATTCCTCTTGTTTGGTTGAATATATGGTACCGGGGTTACTATCTTGCAACATCTCGTGAATTAACTCGCTTAGATTCAATTACCAAAGCACCAGTTATTCATCACTTCTCTGAAAGCATTGCAGGGGTCATGACAATTCGTGCATTCAGAAAGCAAAATAATTTTTGTGAAGAAAATCTCAAACGTGTGAATGCTAATTTGCGTATGGATTTCCACAACTATAGTTCTAATGTGTGGTTGGGAATACGCTTAGAGTTGCTTGGAAGCTTTGTCTTATGCACTTCTGCAATGTTCATGATCATCTTACCCAGCAGTATCATAAAGCCAGAAAATGTTGGTTTATCTCTCTCTTATGGGTTGTCCTTAAACGGTGCCTTGTTCTTTTCTGTAATCATGAGTTGTTTCATCGAAAACAAGTTGGTGTCTGTTGAGAGGATAAAGCAATTTACAAATATTCCATCGGAACCAGCGTGGAATATGAAGGATCATCTGCCTCCTTCAAATTGGCCAGCTCAAGGCAATGTAGATATCAAAGACTTGCAGGTCAGATATCGATCAAACACTCCTTTGGTTCTTAAAGGCATTACTTTAAGCATTAATGGAGGTGAAAAGGTTGGTGTTGTGGGACGAACTGGGAGCGGAAAGTCAACTTTGATTCAAGTATTCTTCAGGCTGGTGGAACCTTCCGGAGGGAAAATAATAATTGATAGTATTGACATATCAGCCTTGGGGCTTCATGATCTTAGATCACGGTTTGGTATCATTCCTCAGGAGCCTGTCCTTTTTGAAGGAACTGTCAGAAGCAACATCGATCCAATTGGATTGTATACCGATGATGAAATATGGAAAAGCTTGGAACGGTGTCAACTAAAAGAGGCTGTTGCTGCTAAGCCTGAAAAACTGAACTCTTTAGTGGTGGATAGTGGAGAGAACTGGAGTGTGGGGCAAAGACAATTGCTTTGTCTAGGAAGGGTTATGCTTAAGAAAAGTCGACTCTTGTTTATGGATGAGGCAACTGCTTCTGTTGATTCTCAAACCGATGGTGTGGTTCAGAAGATCATTAGAGAGGACTTTGCAACATGTACCATCATTAGCATTGCTCACAGAATACCCACAGTCATGGACTGTGACAGAGTTTTAGTAATAGATGCAGGGCGAGCCAAAGAATATGATAAGCCCTCCAACTTGCTTCAGAGGCAATCTCTCTTTGGGGCATTAGTTCAAGAGTATGCAAATCGCTCCACTGGACTATAA 4701 0.4288 MQHEVLNSQYFIAYLWFYEVDEIAECNRHYTTWEQIKLKVKFLESGGRAHTRKNMSLASSTWITSLSCSFPERQASGDTFIAALPQWLRFIFLSPCPQRAMLSFVDVVLLLFLFVFAVTKLWRRFTFTSHGGSPTNLDEPLIRNNRSIFLTTMWFKLTLAVVIVLTTLYTVGSVLAFSSSSEVPWKQVDEVFWLVQAITHAVLVVLIIHERRFKALTHPLSVRVYWIANFFVISLLTVSAIIRLVSVDVDGTISSFKVDDVVAFISLPLSLFLLFVAVKGSTGIVFPTEETQALVDEETELYDGGETKSDVTGFASASISSKLFLTWINPLLRKGYESALKIDEIPTLSSEFRAESLSSIFETKWPKSNERSKHPVSITLLRCFWKQLAFNAFLAIIRLCVMFVGPVLIQSFIDYTSGKRTSVYEGYYLVLILLVAKFIEVLATHHSNYEAQKIGTLLRSTLIPSLYKKGLMLSFSARQDHGVGTIVNYMAVDTQQLSDMMMQLNAVWTTPLQVVIGLFLLYNGLGASTVSAFLGLLCVLVFAVIGTRRNNRFQYSVMRNRDSRMKAVNEMLNYMRVIKFQAWEEHFNQRIMGFRETEYGWLSKLMFTICGNIVVMWSTPLLVSTLTFGTAVLLGVQLDAATVFTTTTVFKILQEPIRTFPQSMIALSQAMISLERLNKFMSSRELLDDSVERAEGCAGQTAVEIIDGTFSWDDDNMQQDLKNINLAIKKGELTAIVGTVGSGKSSLLASILGEMRKISGKVRVCGSVAYVAQTSWIQNGTIEENILFGLPMDRRKYSEVIRVCCLEKDLEMMDYGDQTEIGERGINLSGGQKQRIQLARAVYQDCDIYLLDDVFSAVDAHTGSEIFKECVRGALKGKTIILVTHQVDFLHNVDQILVTRDGNVVQSGKYDDLLDSGMDFKALVVAHDTSMELVEQGQVEVMPSENLNKPMKSPEAKNSGESNSLDRPAGSSKKSSKLIKEEERETGKVNLNIYKIYCTEAFGWWGITVVVVLTLLWQASMMASDYWLAYETSEERAQVFNPSMFISIYAIITVVSVILVVIRSYFFTLLGLKTAQIFFTQILRSILHAPMSFFDTTPSGRILSRASTDQSNVDIILPLFMGIVIAMYITVLSILIITCQNSWPTVFLIIPLVWLNIWYRGYYLATSRELTRLDSITKAPVIHHFSESIAGVMTIRAFRKQNNFCEENLKRVNANLRMDFHNYSSNVWLGIRLELLGSFVLCTSAMFMIILPSSIIKPENVGLSLSYGLSLNGALFFSVIMSCFIENKLVSVERIKQFTNIPSEPAWNMKDHLPPSNWPAQGNVDIKDLQVRYRSNTPLVLKGITLSINGGEKVGVVGRTGSGKSTLIQVFFRLVEPSGGKIIIDSIDISALGLHDLRSRFGIIPQEPVLFEGTVRSNIDPIGLYTDDEIWKSLERCQLKEAVAAKPEKLNSLVVDSGENWSVGQRQLLCLGRVMLKKSRLLFMDEATASVDSQTDGVVQKIIREDFATCTIISIAHRIPTVMDCDRVLVIDAGRAKEYDKPSNLLQRQSLFGALVQEYANRSTGL 1566
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed2g2208 1566 Coils Coil 1195 1215 - -
Aed2g2208 1566 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1317 1557 IPR027417 -
Aed2g2208 1566 Gene3D ABC transporter type 1, transmembrane domain 970 1305 IPR036640 GO:0005524|GO:0016021
Aed2g2208 1566 Pfam ABC transporter 721 854 IPR003439 GO:0005524
Aed2g2208 1566 SUPERFAMILY ABC transporter transmembrane region 1004 1304 IPR036640 GO:0005524|GO:0016021
Aed2g2208 1566 SUPERFAMILY ABC transporter transmembrane region 379 682 IPR036640 GO:0005524|GO:0016021
Aed2g2208 1566 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 703 926 IPR003439 GO:0005524
Aed2g2208 1566 PANTHER ABC TRANSPORTER C FAMILY MEMBER 4 149 1565 - -
Aed2g2208 1566 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 702 923 IPR027417 -
Aed2g2208 1566 Gene3D ABC transporter type 1, transmembrane domain 376 678 IPR036640 GO:0005524|GO:0016021
Aed2g2208 1566 Pfam ABC transporter 1341 1489 IPR003439 GO:0005524
Aed2g2208 1566 CDD ABCC_MRP_domain1 703 902 - -
Aed2g2208 1566 ProSitePatterns ABC transporters family signature. 828 842 IPR017871 GO:0005524
Aed2g2208 1566 MobiDBLite consensus disorder prediction 944 980 - -
Aed2g2208 1566 Pfam ABC transporter transmembrane region 1012 1266 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Aed2g2208 1566 Pfam ABC transporter transmembrane region 390 656 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Aed2g2208 1566 Gene3D - 1307 1557 IPR027417 -
Aed2g2208 1566 Gene3D - 679 947 IPR027417 -
Aed2g2208 1566 CDD ABCC_MRP_domain2 1322 1542 - -
Aed2g2208 1566 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 392 669 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Aed2g2208 1566 SMART AAA_5 1350 1534 IPR003593 -
Aed2g2208 1566 SMART AAA_5 730 903 IPR003593 -
Aed2g2208 1566 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 149 1565 - -
Aed2g2208 1566 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 1009 1287 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Aed2g2208 1566 CDD ABC_6TM_ABCC_D2 1007 1299 IPR044726 GO:0140359
Aed2g2208 1566 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1324 1558 IPR003439 GO:0005524
Aed2g2208 1566 CDD ABC_6TM_ABCC_D1 390 677 IPR044746 GO:0140359
Aed2g2208 1566 MobiDBLite consensus disorder prediction 951 971 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed2g2208 Aed-Chr2 25841254 25848360 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed2g2208 659 919 Calmodulin-binding Proteins AT2G36910 31.295 4.45e-24 108
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed2g2208 - K05666 gmx:100808752 2575.82
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed2g2208 2 25841254 25848360 Aed2g2208 2 25841254 25848360 ECH