Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed2g2189 ATGAAGGGGAAAAGCCAAAGGATTGGAAAGAAGCAGAGCAAGAAGATGAAGGGCTCGTTGAGTACCAACACTAGGCACTTGCAGCTTCAGCTAGGTCAAGTGTCCCTCTTTTCACTTCAACAACCATCTTCTTCTGCAGTTTCTGGCTTCCAGAACCTTCTCGATGCAGAAGCTCCCAACGCGTCTACCTCACGCATTCCCCTCACCGACGACGCCGATGACAGAGCCTGCATTCTCAGTCAGGACTTCTTTTGCACTCCGGATTACATAACCCCGGATAATCAGAATATTTTCAACGGCGACAAGGATAATACGCCTTGCCCCAAATCGCCGGAGAAGCTGACTACTACCAAAAGCAAGAGATGCCGACCGGATGCTATGTTAGTACACCCTCTCCGCCCTTTACACCCTCTCAGCCCTACCTTCTCTAGTGACCATCAACCACAACCAGTTGTTGAACTTGGAAATGACTCTGGTACCGAGGAAGTAGATCTTGAGACAACAGTATCACCTGTGAAACCAAAGGCTCAAAATTATGTGTCACATTCTGCAGTTGCATTGCGTTGCAGAGTTATGCCTCCTCCTTGCTTAAGTAACCCCTATTTAAAAGATGTATCAGGAAAGGATCTAGATCCTTTTGGAAACCAAAGATTGAAATGTGCAGGTCTCTTCCCTTCATTTGCTGGTGGTGATGGGCTTTCACGCTATCGTGCTGACTTTCATGAAATGGAGCAAATTGGTAGAGGGAACTTTAATAGTGTTTTTAAAGTATTGAAACGCATAGATGGCTGCTTGTATGCTATGAAACACAGCACCAGACCACTACGTCTGGAATCAGAAAGGACCAAAGCTTTGCTGGAAGTTCAAGCCTTGGCTGCCTTAGGTTTGCATAAGAACATTGTGGGCTACTATTCTTCATGGTTTGAAAATGAACAGCTGTACATTCAGTTGGAGCTATGTGATCACAGTTTGTCTGTAAGAAGATTCCCTGCGTCATTTACAGAAGAACAAGTGTTAGAGGCCTTATTGCAGGTTTCCAATGCGCTGCAATTTATTCACGAGAAGGGAATAGCTCACCTAGATGTCAAACCTGAGAATATTTATGTGAAAAATGGTGTTTATAAGCTTGGCGATTTTGGATGTGCAACTCTTCTGGATGGTAGCCTGTCAATTGATGAAGGCGACGCACGTTATATGCCCCAGGAAATCCTTAATGAGAATTATGATCACCTTGACAAGGTTGATATCTTCTCCTTGGGAGCTTCTATTTATGAACTAATTCGCAGATTGCCTTTGCCAGAATCAGGATGTCAGTTTCTTAATCTCAAAGAGGGCAAGTTTCCCCTTCTGCCTGGTCACTCGTTGCAACTTCAAAACTTGCTCAAGGTCATGATGGACCCTGATCCGGTTAAGCGGCCTTCTGCTAAAGAATTGGTGGAGAACCCAATTTTTTGTAGGATTCAAAGAACAGCATGA 1476 0.4451 MKGKSQRIGKKQSKKMKGSLSTNTRHLQLQLGQVSLFSLQQPSSSAVSGFQNLLDAEAPNASTSRIPLTDDADDRACILSQDFFCTPDYITPDNQNIFNGDKDNTPCPKSPEKLTTTKSKRCRPDAMLVHPLRPLHPLSPTFSSDHQPQPVVELGNDSGTEEVDLETTVSPVKPKAQNYVSHSAVALRCRVMPPPCLSNPYLKDVSGKDLDPFGNQRLKCAGLFPSFAGGDGLSRYRADFHEMEQIGRGNFNSVFKVLKRIDGCLYAMKHSTRPLRLESERTKALLEVQALAALGLHKNIVGYYSSWFENEQLYIQLELCDHSLSVRRFPASFTEEQVLEALLQVSNALQFIHEKGIAHLDVKPENIYVKNGVYKLGDFGCATLLDGSLSIDEGDARYMPQEILNENYDHLDKVDIFSLGASIYELIRRLPLPESGCQFLNLKEGKFPLLPGHSLQLQNLLKVMMDPDPVKRPSAKELVENPIFCRIQRTA 491
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed2g2189 491 Pfam Protein kinase domain 240 484 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed2g2189 491 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2-ALPHA KINASE EIF2-ALPHA KINASE -RELATED 411 488 - -
Aed2g2189 491 ProSitePatterns Serine/Threonine protein kinases active-site signature. 357 369 IPR008271 GO:0004672|GO:0006468
Aed2g2189 491 ProSiteProfiles Protein kinase domain profile. 240 484 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed2g2189 491 Gene3D Transferase(Phosphotransferase) domain 1 320 488 - -
Aed2g2189 491 SMART serkin_6 240 484 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed2g2189 491 MobiDBLite consensus disorder prediction 100 119 - -
Aed2g2189 491 PANTHER BNAA08G27310D PROTEIN 22 398 - -
Aed2g2189 491 SUPERFAMILY Protein kinase-like (PK-like) 234 487 IPR011009 -
Aed2g2189 491 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2-ALPHA KINASE EIF2-ALPHA KINASE -RELATED 22 398 - -
Aed2g2189 491 PANTHER BNAA08G27310D PROTEIN 411 488 - -
Aed2g2189 491 Gene3D Phosphorylase Kinase; domain 1 231 319 - -
Aed2g2189 491 MobiDBLite consensus disorder prediction 1 24 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed2g2189 Aed-Chr2 25754730 25757677 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed2g2189 2 488 Core Cell Cycle Gene Families AT1G02970 58.551 0.0 555
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK WEE Aed2g2189 Pkinase 5.2e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed2g2189 K06632 - gmx:547742 843.188
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed2g2189 2 25754730 25757677 Aed2g2189 2 25754730 25757677 ECH