Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed2g2182 ATGGTGGAAAGGAGGAGAAAGCCTCTGATACTCTGTTCCACCAAACATGTCATAAATTCCATTGCCCCAAGCAACAACCTCTTCTTCTCCGATGAACCTTCTCCAACTTTACGCTTACCCGTTGGGATTCTCAGATTCTCCAACCTCCTCGAAAACCCCTCTTTCGACCACTCTGCACTCCTCGCACTCTCCACAAATCTTCTCAAAACCCTTTCCATCACTTCAGGCTCACCGGTTCTTGTCAAGAATGTTAATACCAACACACAGAAGATTGCAGTAGCCGTTGCTCTTGATCCGCCTGGCACCACCACTAACATAGATTCATCACCCTCTTCAAATTCTCGAATAATGCTTCTTTTTCCTTCTTGTGATTTCCCTTCTAATGGTTCTGTGTTAGATTATCAAGTAGCTTACGTATCTCCTCTTTTAGCCTTTAACCTTAACTTGCACGTGGCGTGCTTAAAGTCTATTCTTCACCACGGGCAAGATGCTTTAGCTTCTCATTTCAAAAGGGGTGGTGAGGATGCTGCTAAAAGCACCGTGGATTCTGTCATCAACGTAGAATTAGAACCACTTGGTCAACCTCCGAAATTTGTCTCTCTTTTGAGGGTTTCTTTTGTTAAGATACCTGAATGTGGCATCCTTGAATCCATTAGAGCAAGTTCACCTGTTGAGTCCCAAGAGCGGCAAGACTTGATCGACTTGTCTCTGCAAAAGTACTTTGAAGTTGATAGGTATTTGTCAAAGGGAGATGTTTTTGGAATTAACATAAGCTGGAACTGCAATTCCCCCATTTGCATTCCTTGCAATCAAAGATCATTAAATACAAATGACAACCTTATCTGTTTCAAGGTTGTTGGTATGGAACCATCAGATGAACCTGTTTTCCGTGTCAATAACACCTTAACTGCTCTCGTTCTGGTAGGGAGTTCTCCATCCGCACTCCCACCAGATTTGTTGATTGGTAGACCAGCAGAAGGACATATGCCTTTGCAAGGGGACACTGTGAACATCTTGGCTTCAATACTTACACCAACTTTCTGTCCATCCGTGCTTTCTTCCAAGTTTAGAGTTTCAGTTCTATTGTATGGCTTGGCAGGTTGTGGGAAAAGGACTCTTGTTAGATATGTTGCTCGTCGACTGGGCCTGCATGTGGTGGAATATAACTGTCATGGTCTAATGGTGTCTGATAGAACATCTGTTGCTTTAGCACAAGCTTTCAAGACAGCTCGGAGATACTCACCAGCAATACTTCTTCTTCGTCATTTTGATGTTTTTCGTGATTCGCAATCGCCTGAGGTTTCACCACAAGACCAAAGAGGAAATACATCTGAAGTTGCATCAGTTATCAGGAAATTCACTGAGCCACTCAGTGAACATGGTGATAGTAATGTCCTGGGGAAATCAAACGGTGAATCTGTGGAGAAGAATGCTGAAATGACAAGTGGGCATCAGGTCCTGTTGATTGCTGCTGCAGACAGTCCAGAAGGTCTGCCTTCAAGTATCAGACGTTGTTTTAGCCATGAAATAAGCATGGGGCCTTTGACTGAAGAGCAAAGGGCTGAAATGCTATTCCAGTCACTGCAAAGTGTTTCCGGACTCCTCTCTAATACATCTGGTTACATGCCCAGGGATATAAGTGCTTTAATTGCTGATGCTGGTGCCAACTTATTTCCCAGAAACAATGCTAAAGTAAACAAAGATGTGCCTGATGATGTAGGTAGTTCCTTTAGTTCCAAGATGGCAGATGACAACAATCATGGGAAAGTTTCACCTCAGATTACTGGGAAAGAAGACTTGTTGAATGCTTTGGAACAATCAAAGAAAAGAAATGCATCAGCGTTGGGTACTCCAAAGGTTCCAAATGTGAAATGGGAAGATGTTGGTGGGCTTGAAGATGTCAAAAAGTCAATTCTGGATACTGTTCAGTTACCTCTCCTGCATAAAGATCTATTTTCATCTGGATTACGTAAGCGATCTGGTGTTCTTTTGTACGGTCCCCCTGGAACTGGCAAAACTTTATTAGCAAAAGCTGTTGCTACAGAGTGCTCCTTAAATTTTCTTAGCGTGAAAGGTCCTGAACTGATCAACATGTACATTGGAGAGTCTGAAAAGAATGTTCGAGACATTTTTCAGAAGGCCAGATCAGCACGTCCATGTGTTATCTTCTTTGATGAGCTTGATTCTCTTGCACCCGCTCGGGGTGCTTCTGGAGATTCTGGGGGTGTTATGGACAGAGTGGTTTCCCAGATGCTTGCAGAGATTGACGGCTTAAGTGATTCCTCACAGGATCTGTTTATTATAGGTGCAAGTAATAGACCAGACTTGATAGACCCAGCACTTCTGCGCCCTGGTCGATTTGACAAACTGCTATATGTTGGAGTTAACTCTAATGCATCTTACAGGGAGCGGGTCTTGAAAGCTCTTACCCGAAAGTTCAAATTGCATGAAGATGTTTCACTTTACTCCATAGCAAAAAAATGTCCACCAAACTTCACTGGTGCAGACATGTATGCTTTATGTGCAGATGCTTGGTTCCATGCTGCAAAGCGCAAAGTTTTGAGTGCAAATCCTGAGTCTTCCAGCCAAGATAATGAAGCAGAATCTGTTGTTGTTGAATACAATGATTTTGTCCAGGTCTTAGAAAAGCTGTCGCCTTCCCTCTCAATGGCTGAGCTTAAGAAATACGAGCAACTGAGAGATCAGTTTGAAGGCACCTCTAAATGA 2727 0.4312 MVERRRKPLILCSTKHVINSIAPSNNLFFSDEPSPTLRLPVGILRFSNLLENPSFDHSALLALSTNLLKTLSITSGSPVLVKNVNTNTQKIAVAVALDPPGTTTNIDSSPSSNSRIMLLFPSCDFPSNGSVLDYQVAYVSPLLAFNLNLHVACLKSILHHGQDALASHFKRGGEDAAKSTVDSVINVELEPLGQPPKFVSLLRVSFVKIPECGILESIRASSPVESQERQDLIDLSLQKYFEVDRYLSKGDVFGINISWNCNSPICIPCNQRSLNTNDNLICFKVVGMEPSDEPVFRVNNTLTALVLVGSSPSALPPDLLIGRPAEGHMPLQGDTVNILASILTPTFCPSVLSSKFRVSVLLYGLAGCGKRTLVRYVARRLGLHVVEYNCHGLMVSDRTSVALAQAFKTARRYSPAILLLRHFDVFRDSQSPEVSPQDQRGNTSEVASVIRKFTEPLSEHGDSNVLGKSNGESVEKNAEMTSGHQVLLIAAADSPEGLPSSIRRCFSHEISMGPLTEEQRAEMLFQSLQSVSGLLSNTSGYMPRDISALIADAGANLFPRNNAKVNKDVPDDVGSSFSSKMADDNNHGKVSPQITGKEDLLNALEQSKKRNASALGTPKVPNVKWEDVGGLEDVKKSILDTVQLPLLHKDLFSSGLRKRSGVLLYGPPGTGKTLLAKAVATECSLNFLSVKGPELINMYIGESEKNVRDIFQKARSARPCVIFFDELDSLAPARGASGDSGGVMDRVVSQMLAEIDGLSDSSQDLFIIGASNRPDLIDPALLRPGRFDKLLYVGVNSNASYRERVLKALTRKFKLHEDVSLYSIAKKCPPNFTGADMYALCADAWFHAAKRKVLSANPESSSQDNEAESVVVEYNDFVQVLEKLSPSLSMAELKKYEQLRDQFEGTSK 908
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed2g2182 908 CDD AAA 656 794 - -
Aed2g2182 908 Pfam ATPase family associated with various cellular activities (AAA) 662 794 IPR003959 GO:0005524|GO:0016887
Aed2g2182 908 Pfam ATPase family associated with various cellular activities (AAA) 360 511 IPR003959 GO:0005524|GO:0016887
Aed2g2182 908 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 621 902 IPR027417 -
Aed2g2182 908 Gene3D - 337 534 IPR027417 -
Aed2g2182 908 SMART AAA_5 356 516 IPR003593 -
Aed2g2182 908 SMART AAA_5 658 797 IPR003593 -
Aed2g2182 908 ProSitePatterns AAA-protein family signature. 765 783 IPR003960 GO:0005524|GO:0016887
Aed2g2182 908 PANTHER AAA-FAMILY ATPASE 36 904 - -
Aed2g2182 908 Gene3D - 796 882 - -
Aed2g2182 908 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 355 560 IPR027417 -
Aed2g2182 908 Gene3D - 620 897 IPR027417 -
Aed2g2182 908 CDD AAA 350 420 - -
Aed2g2182 908 PANTHER PEROXISOME ASSEMBLY FACTOR 2 36 904 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed2g2182 Aed-Chr2 25690972 25698606 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed2g2182 628 853 Calmodulin-binding Proteins AT3G56690 39.207 1.32e-39 157
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed2g2182 K13339 - gmx:100820183 1628.61
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed2g2182 2 25690972 25698606 Aed2g2182 2 25690972 25698606 ECH
Aed8g0353 8 2921956 2922345 Aed2g2182 2 25690972 25698606 PCT