Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed2g2154 ATGAAGATGAGGTTTTTCCTTGTAGCTTGTTTGGCAGTGTTCTGCATCCTAGGGGTTTGTCAAGGAGGCAACCTCAGAAAGAAATTCTACAAGAAAACATGTCCTCAAGCCGAGGATATTGTTAGTTCCAAAATCCAGGAACATCTCTCTGCAAGGCCCGATTTGCCTGCCAAGTTGATCAGATTGCATTTTCATGACTGTTTTGTCAGGTTTAATAAGCCTACATGGGAAGTACTCACCGGTAGAAGAGATGGCAGAGTATCCATAAGTGGTGAAGCCTTAGCCAATCTGCCAGCACCTTTCTTCAACTTCACCCAGCTCAAAGCAAGTTTTGCTAGTAAAAATCTTACTGTGCACGACCTGGTTGTATTATCAGGAGCACACACAATTGGGATAGGTCACTGCAACTTGTTCAGTAACAGACTTTTCAACTTTACCGGAAAAGGTGATCAAGATCCTTCTTTGAATCCTACTTATGCAAACTTTTTGAAGACAAAATGCCAAGGTCTGAGTGACACAGCCACAACAGTGGAGATGGATCCTAACAGCTCAACCACCTTTGACAGTGACTATTATTCTATCCTTGGCCAGAACAAGGGTCTATTCCAATCAGATGCTGCCCTTTTAACAACAAAGATATCAAGAAACATTGTGAACGAATTGGTCAAACAAAGCAAGTTCTTCACAGAGTTCGGGCAGTCAATGAAGAGAATGGGAGCCATTGAGGTCCTCACAGGCTCCGATGGGGAAATTAGAAGCAAGTGCTCTGTTGTCAACTCTTAA 783 0.4291 MKMRFFLVACLAVFCILGVCQGGNLRKKFYKKTCPQAEDIVSSKIQEHLSARPDLPAKLIRLHFHDCFVRFNKPTWEVLTGRRDGRVSISGEALANLPAPFFNFTQLKASFASKNLTVHDLVVLSGAHTIGIGHCNLFSNRLFNFTGKGDQDPSLNPTYANFLKTKCQGLSDTATTVEMDPNSSTTFDSDYYSILGQNKGLFQSDAALLTTKISRNIVNELVKQSKFFTEFGQSMKRMGAIEVLTGSDGEIRSKCSVVNS 260
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed2g2154 260 Gene3D - 25 71 - -
Aed2g2154 260 Gene3D Peroxidase, domain 2 98 238 - -
Aed2g2154 260 ProSiteProfiles Plant heme peroxidase family profile. 57 259 IPR002016 GO:0004601|GO:0006979|GO:0020037
Aed2g2154 260 PANTHER PEROXIDASE 4 70 - -
Aed2g2154 260 PANTHER PEROXIDASE 25-RELATED 72 258 IPR000823 GO:0004601|GO:0006979|GO:0020037
Aed2g2154 260 ProSitePatterns Peroxidases proximal heme-ligand signature. 120 130 IPR019793 -
Aed2g2154 260 CDD secretory_peroxidase 24 258 IPR033905 GO:0004601|GO:0042744
Aed2g2154 260 PRINTS Plant peroxidase signature 34 53 IPR000823 GO:0004601|GO:0006979|GO:0020037
Aed2g2154 260 PRINTS Plant peroxidase signature 58 78 IPR000823 GO:0004601|GO:0006979|GO:0020037
Aed2g2154 260 Gene3D - 72 259 - -
Aed2g2154 260 PRINTS Haem peroxidase superfamily signature 180 195 IPR002016 GO:0004601|GO:0006979|GO:0020037
Aed2g2154 260 PRINTS Haem peroxidase superfamily signature 56 70 IPR002016 GO:0004601|GO:0006979|GO:0020037
Aed2g2154 260 PRINTS Haem peroxidase superfamily signature 116 133 IPR002016 GO:0004601|GO:0006979|GO:0020037
Aed2g2154 260 Pfam Peroxidase 73 222 IPR002016 GO:0004601|GO:0006979|GO:0020037
Aed2g2154 260 PANTHER PEROXIDASE 72 258 - -
Aed2g2154 260 PANTHER PEROXIDASE 25-RELATED 4 70 IPR000823 GO:0004601|GO:0006979|GO:0020037
Aed2g2154 260 SUPERFAMILY Heme-dependent peroxidases 25 259 IPR010255 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed2g2154 Aed-Chr2 25528132 25529454 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed2g2154 57 259 Peroxidase AT4G11290 52.427 1.08e-67 211
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed2g2154 K00430 - gmx:100775970 363.614
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed8g1414 8 18725611 18730743 Aed2g2154 2 25528132 25529454 PCT