Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed2g2144 ATGGGCGCCAATTCCATGCTCTCCGAGTCCTCTCAGGATCTCGACGACCAGATCTCTCAGCTCATGCAGTGCAAGCCACTCTCCGAGCAACAGGTCAGAGGTTTATGTGAGAAGGCTAAGGAGATTTTAATGGATGAAAGTAATGTTCAGCCTGTTAAAAGCCCTGTGACAATTTGTGGCGATATTCATGGGCAGTTTCATGATCTTGCTGAACTGTTTCGAATTGGAGGGAAGTGTCCAGATACTAACTACTTGTTTATGGGTGATTATGTGGACCGGGGTTATTATTCAGTTGAGACTGTAACAATTACTCAAGTATATGGATTTTATGATGAATGCCTTAGAAAGTATGGTAATGCTAGTGTTTGGAAGACCTTTACAGACCTTTTTGATTTTTTTCCATTGACTGCATTGGTTGAATCAGAAATATTCTGCTTGCATGGTGGACTGTCACCTTCAATTGAGACACTTGATAACATAAGGAACTTTGATCGTGTTCAAGAGGTCCCTCATGAAGGCCCCATGTGTGATCTATTGTGGTCTGACCCAGATGACAGATGTGGCTGGGGAATTTCTCCTCGTGGGGCTGGATATACCTTTGGCCAGGATATATCTGAACAATTCAATCACACAAACAGCCTTAAGTTGATTGCTAGAGCTCATCAGCTTGTTATGGATGGATTTAATTGGGCTCATGAGCAAAAGGTGGTTACCATTTTTAGTGCACCTAACTACTGTTACCGATGTGGGAACATGGCTTCCATATTGGAGGTTGATGATTGCAAGGGCCACACATTTATCCAGTTTGATCCTGCTCCTAGGAGAGGAGAACCTGATGTGACTCGTAGAACGCCTGATTACTTCTTATAA 870 0.4299 MGANSMLSESSQDLDDQISQLMQCKPLSEQQVRGLCEKAKEILMDESNVQPVKSPVTICGDIHGQFHDLAELFRIGGKCPDTNYLFMGDYVDRGYYSVETVTITQVYGFYDECLRKYGNASVWKTFTDLFDFFPLTALVESEIFCLHGGLSPSIETLDNIRNFDRVQEVPHEGPMCDLLWSDPDDRCGWGISPRGAGYTFGQDISEQFNHTNSLKLIARAHQLVMDGFNWAHEQKVVTIFSAPNYCYRCGNMASILEVDDCKGHTFIQFDPAPRRGEPDVTRRTPDYFL 289
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed2g2144 289 PRINTS Serine/threonine phosphatase family signature 84 111 IPR006186 GO:0016787
Aed2g2144 289 PRINTS Serine/threonine phosphatase family signature 235 251 IPR006186 GO:0016787
Aed2g2144 289 PRINTS Serine/threonine phosphatase family signature 55 82 IPR006186 GO:0016787
Aed2g2144 289 PRINTS Serine/threonine phosphatase family signature 213 233 IPR006186 GO:0016787
Aed2g2144 289 SMART pp2a_7 27 273 IPR006186 GO:0016787
Aed2g2144 289 Pfam Calcineurin-like phosphoesterase 55 222 IPR004843 GO:0016787
Aed2g2144 289 PANTHER SERINE/THREONINE-PROTEIN PHOSPHATASE PP2A-RELATED 1 103 - -
Aed2g2144 289 PANTHER SERINE/THREONINE-PROTEIN PHOSPHATASE PP2A-RELATED 103 289 - -
Aed2g2144 289 CDD MPP_PP2A_PP4_PP6 13 273 - -
Aed2g2144 289 PANTHER SERINE/THREONINE-PROTEIN PHOSPHATASE PP2A-4 CATALYTIC SUBUNIT 1 103 - -
Aed2g2144 289 PANTHER SERINE/THREONINE-PROTEIN PHOSPHATASE PP2A-4 CATALYTIC SUBUNIT 103 289 - -
Aed2g2144 289 Gene3D - 6 289 IPR029052 -
Aed2g2144 289 SUPERFAMILY Metallo-dependent phosphatases 11 274 IPR029052 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed2g2144 Aed-Chr2 25463762 25469033 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed2g2144 35 219 Calmodulin-binding Proteins AT5G63870 29.880 3.97e-19 83.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed2g2144 K04382 - gmx:100775812 586.26