Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed2g2126 ATGCGGAGCTTTAGGATGAGAAACTTGTTGTCCCGTGTCAAAAAGAAAACCATAAAAAACAGAACCAGAGCCTCACGAAACTGCATCTCCAATATAACAAAAGAGTTAGCACGTTTAGTGGAACAACCAGAAGAAGAAGTTAACGAGGAAGGGTTCAGCATCAAAAGCTCTGCCCCATCACACACTCACGGTGTTCAACCCTTGGGGAATCTCTATCTGAACACAGGTTCCACCAACAACTCCAGAGACACTGGCTTAGGTAATCTTAATACCCTTTCGGATGAGCTTGTTCTCGACATTCTTGGGTTTTTGGATTCCACTTCCTTAGGGGTTTTGGCCAATGTGAGCAAGTCCTTCTACGTCTTCACCAACCATGAACCCCTTTGGAGGAATCTCGTGTTGGAGAATCTTCTCGGTGGGTTTCACTACAAAGGCTCTTGGAAATCCACTTATGTTTCTGCTTGTTACCCTTCATTTGACAATAACTCCACTGTTGCTCTTGGGGGTTTCAAAGTTAGAGACTTTTACTCGGATTATCTCTTCCAGAGTTGGCTCTGTGCTAACCTTGAAATGAAGCCTGAGTGGTTGGAGAGGGATAATGTGGTTCGGAAGAGAGGAATTTCGGTTGAGGAGTTTGTGTTGAATTTCGAAGAGCCTATTAAGCCGGTGTTATTGGAAGGGTGTATTGATAATTGGGATGCTTTGAGGAATTGGGATAGGGATTATTTGATGCGATTGTGTGGTGATGTTAAGTTTTCGGTTGGGCCAGTGGAGATGAAGCTTGGAGAATATTTTGGGTACTCGGATTTGGTTAGAGAGGAAAGGCCTTTGTATTTGTTTGATCCTAAGTTTGCTGAGAAAGTTCCCCAATTGGGTGATGAATATGAAGTTCCGGTGTACTTTAGGGAGGATTTGTTTGGTGTTTTGGGCAATGAGAGGCCAGACTACAGGTGGGTTATTATTGGACCTGCTGGGTCTGGATCTTCGTTCCATGTTGATCCGAATTCGACTTCGGCTTGGAATGCAGTGATTAAGGGGTCCAAGAAATGGATTTTGTTTCCTCCCGATGTGATTCCGCCTGGTGTTCATCCTAGTCCTGATGGTGCGGAGGTGGCATCTCCTGTTTCAATAATTGAATGGTTCATGAACTTCTATGGTGCAACCAAAAATTGGATAAAGAAACCAATTGAGTGCGTATGTAAAGCTGGGGAGGTTATCTTTGTGCCTAGTGGATGGTGGCATTTGGTGATCAACCTGGAGGAATCTGTAGCCATAACCCAAAACTATGTTAGTAGGAGAAATTTGATAAATGTCTTGGATTTTCTTAAAAGGCCAAATGCTAGCTCACTGGTATCTGGAACAAGGGATAGAGTGAATTTGTACGATAAGTTTAAGAATGCTATCGAGGCTTCTTTTCCTGGAGAAATTGATGAATTGACTCTGAAAGAAGAAGAAAAAAAGATCCAGCAGAGGAAACCTTCCTTCTGGGATTCTGTCATGGATACCAACGCGGGGGCTTTCAAGTTCTGTTTCTAG 1536 0.4336 MRSFRMRNLLSRVKKKTIKNRTRASRNCISNITKELARLVEQPEEEVNEEGFSIKSSAPSHTHGVQPLGNLYLNTGSTNNSRDTGLGNLNTLSDELVLDILGFLDSTSLGVLANVSKSFYVFTNHEPLWRNLVLENLLGGFHYKGSWKSTYVSACYPSFDNNSTVALGGFKVRDFYSDYLFQSWLCANLEMKPEWLERDNVVRKRGISVEEFVLNFEEPIKPVLLEGCIDNWDALRNWDRDYLMRLCGDVKFSVGPVEMKLGEYFGYSDLVREERPLYLFDPKFAEKVPQLGDEYEVPVYFREDLFGVLGNERPDYRWVIIGPAGSGSSFHVDPNSTSAWNAVIKGSKKWILFPPDVIPPGVHPSPDGAEVASPVSIIEWFMNFYGATKNWIKKPIECVCKAGEVIFVPSGWWHLVINLEESVAITQNYVSRRNLINVLDFLKRPNASSLVSGTRDRVNLYDKFKNAIEASFPGEIDELTLKEEEKKIQQRKPSFWDSVMDTNAGAFKFCF 511
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed2g2126 511 ProSiteProfiles F-box domain profile. 86 132 IPR001810 GO:0005515
Aed2g2126 511 Pfam F-box-like 94 134 IPR001810 GO:0005515
Aed2g2126 511 PANTHER AND JMJC DOMAIN PROTEIN, PUTATIVE (AFU_ORTHOLOGUE AFUA_3G08170)-RELATED 54 508 - -
Aed2g2126 511 PANTHER ARGININE DEMETHYLASE AND LYSYL-HYDROXYLASE JMJD 54 508 - -
Aed2g2126 511 SUPERFAMILY F-box domain 82 154 IPR036047 GO:0005515
Aed2g2126 511 SMART fbox_2 92 132 IPR001810 GO:0005515
Aed2g2126 511 SMART cupin_9 277 446 IPR003347 -
Aed2g2126 511 Gene3D - 77 158 - -
Aed2g2126 511 ProSiteProfiles JmjC domain profile. 286 446 IPR003347 -
Aed2g2126 511 Gene3D Cupin 182 431 - -
Aed2g2126 511 SUPERFAMILY Clavaminate synthase-like 205 443 - -
Aed2g2126 511 Pfam Cupin-like domain 212 429 IPR041667 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed2g2126 Aed-Chr2 25354513 25362237 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed2g2126 73 435 Glycosyltransferase AT1G78280 38.978 1.91e-77 259
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Jumonji Aed2g2126 Cupin_8 5.8e-22 CL0029
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed2g2126 - - gmx:100782241 954.125