Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed2g2114 ATGGAAGCAGTAGTGGTAAAAGGATCAAAGTGTGAAGACTGTGGGAACCAAGCGAAGAAGGATTGTGCATACTCAAGGTGCAGAACTTGCTGCAAGAACAAAGCCTTTAACTGCCAAACCCATATAAGAAGCACTTGGATTCCTGTCGATACAAGGCGCCACAAACTGCAGGACCAACCTCGACTCACTACTAATCTTCAGCTTCACGAAGATATTCCTAAAAGCCACAACAAGCACCACCAATATTCAAGTTTGGATCAGGAGTTAAAATTTCCAGCTGTTATGAGTTCCATGGCATTATTCAACTGCGTTCAGGTGCGTTCTATGGATGACACGGTTAATGAGATCGCGTATCAAACATCTGTGAACATTGGAGGACATGTTTTTACTGGTCTTCTTTATGATCAAGGTCCTCATCAACAAACCTTCATTAATACTCGTGATGGTGCAAGTGCAACTATGCCTCCACAGCTATCAGTCACTGCTGCTCAGGAACCATTTTTTCCATTTCCCCTAGCTTCTTCCTTCAGACCCTAG 537 0.4358 MEAVVVKGSKCEDCGNQAKKDCAYSRCRTCCKNKAFNCQTHIRSTWIPVDTRRHKLQDQPRLTTNLQLHEDIPKSHNKHHQYSSLDQELKFPAVMSSMALFNCVQVRSMDDTVNEIAYQTSVNIGGHVFTGLLYDQGPHQQTFINTRDGASATMPPQLSVTAAQEPFFPFPLASSFRP 178
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed2g2114 178 TIGRFAM LRP1_Cterm: LRP1 C-terminal domain 90 138 IPR006511 -
Aed2g2114 178 Pfam Domain of unknown function (DUF702) 8 139 - -
Aed2g2114 178 TIGRFAM put_zinc_LRP1: putative zinc finger domain, LRP1 type 10 51 IPR006510 -
Aed2g2114 178 PANTHER BNAC01G23660D PROTEIN 3 153 - -
Aed2g2114 178 PANTHER PROTEIN LATERAL ROOT PRIMORDIUM 1 3 153 IPR007818 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed2g2114 Aed-Chr2 25265627 25266384 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed2g2114 4 140 C2H2 Transcription Factor Family AT2G21400 53.425 2.86e-46 148
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SRS Aed2g2114 DUF702 8e-45 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed2g2114 - - gsj:114376985 261.922