Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed2g2107 ATGAGAAGCTGTGTGTGTTACACGCTTTTATTGTTTGTTTCCTTCACATGGCTCCGGGTGGCAACGTGCTCTTCGTTCAGTGACATGGATGCGCTTCTGAAGCTGAAGGAGTCCATGAAGAAGGGAGAAAAAGCCAAAGACGATGCCCTCCATGACTGGAAGTTTTCCAACTCACTTTCTGCACACTGTTCGTTTTCAGGCGTAACATGCGACCAAGACTTTCGAGTCGTTGCTATCAATGTCTCTTTTGTTCCTCTTTTCGGTCACCTTCCGCCGGAGATCGGAGAATTGGACAGACTGGAAAACCTCACCATCGCGCAGAACAACCTCACCGGCGAACTCCCCAAGGAGCTCACCGCACTCACTTCCCTCAAGCTCCTCAACATCTCTCACAACGTCTTTTCCGGCGATTTCCCCGGCGGAATAATCCTTCCGATGATCGAGCTCGAGGTCCTCGACGTCTACGACAACAACTTCACAGGACCGCTTCCGGAAGAGTTCGTGAAACTGGAGAAACTAAGATACCTGAAGCTCGACGGAAACTATTTCTCCGGCAGCATACCGGAGAGTTACTCTGAGTTCAAGAGCTTGGAGTTCTTGAGCTTAAGCACCAACGGCCTGTCGGGGAAGATTCCGAAGAGTTTGTCTAAGTTGAAGACGCTGAGGTATCTTAAACTCGGATACAACAACGCTTACGAAGGTGGAATTCCGGCGGAGTTCGGCACCATGAAATCTCTGCGATACCTTGACCTCTCTAGCTGTAACCTCAGCGGCGAGATTCCACCGAGTCTTGCAAATTTGATAAATGTTGACACGCTGTTCTTGCAAATGAACAACCTCAGCGGAAGCATTCCGTCGGAGCTCTCCGCTATGGCGAGCCTCATGTCACTGGATCTTTCCTTCAACGGCCTCACCGGTGAGATACCGGTGAGCTTCTCTCGGCTGAGAAACCTCACTCTCATGAACTTGTTCAACAACAATCTCCGCGGCTCTCTTCACCCCTTCGTCGGCGAGCTTCCAAATCTGGAAACTCTGCAGATCTGGGAGAACAACTTTTCCTACGTGCTACCTCAGAATCTTGGACAAAACGGCAAGTTGAAGTTCTTCGATGTGACGAAGAATCACTTCACCGGGTTGATCCCTCCGGATTTGTGCAAGAGTGGGAGGCTACAAATCTTCATGATCACCGATAACTTCTTCCGCGGTCCAATCCCTAACGAGATTGGTAACTGCAAGTCTCTCGTCAAGATCCGAGCGTCCAATAACTACCTTAACGGTGCGGTTCCGTCTGGGATTTTCAAACTACCTTCCGTCAAGATAATCGAGCTCGCCAATAACGGTTTTAACGGGGAGCTGCCTCCCGAGATTTCCGGCGATTCTCTTGGGATTCTCACGCTTTCCAACAACTTATTCAGTGGGAGAATTCCCCCAGCGTTGAAGAACTTGAGGGCACTGCAGACTCTGTTGCTCGACGCGAACGAGTTCGTTGGAGAAATCCCGGGGGAGGTTTTTGATTTACCGATGTTGACCACGGTCAACATAAGCGGCAACAACCTCACGGGAGCAATCCCAGATACGTTGACTCGCTGCGTTTCACTGAATGCCGTTGACCTTAGCCGGAACATGCTTGCAGAGGAGATTCCCAAGGGGATCAAGAACCTCACTGACCTGAGCATTTTCAACGTGTCCAGAAACCAAATAACGGGGCCAGTCCCTGAGGATATTAAGTTCATGTTGAGTCTGACTACGCTGGATCTCTCCTACAACAATTTCATCGGCAAGGTCCCAACCGGGGGTCAGTTCTTTGTGTTTAGCGAGAAGTCGTTTGCGGGGAACCCCAACCTCTGTACCTCCCACTCTTGCCCTAGTTCCTCGATGGCCTTGAAGAAGAGACGAGGACCTTGGAGTTCGAAATCGACGAGGTTGATAGTGATCGTGATTGCACTCGCCACTGTGGCGCTGCTGGTGGCGGTGACGGTGTACATGATGAGGAGGAGGAAGCTGCACCGTGCTATGACGTGGAAGCTGACGGCTTTCCAGAGGCTGAACTTCAAAGCCGAGGAGGTGGTGGAGTGCCTGAAGGAGGAGAACATTATAGGAAAAGGAGGAGCAGGGATCGTGTACCGCGGGTCCATGCCTAACGGAACTGACGTGGCGATAAAGAGGTTGGTTGGGGCTGGGAGTGGGAGGAACGATTACGGATTCAAAGCAGAGATAGAGACGCTGGGGAAGATAAGGCACAGGAACATAATGAGGCTTCTGGGTTACGTGTCGAACAAGGAGACCAACTTGCTTCTGTACGAGTACATGCCGAATGGGAGCTTAGGTGAGTGGCTACATGGTGCGAAGGGAGGGCACTTGAAGTGGGAAATGAGGTACAAGATTGCAGTGGAAGCAGCTAAGGGACTGTGCTATTTGCACCATGATTGTAACCCTCTTATCATTCACAGGGACGTGAAGTCCAATAATATATTGCTGGATGCGGACTTGGAGGCCCATGTCGCCGATTTTGGGCTTGCCAAGTTCTTGTACGACCCAGGCGCCTCTCAGTCCATGTCCTCCATTGCTGGCTCCTACGGCTACATTGCTCCAGAGCTCGCTCAGCCGTCAGATGCAGCTTTAGTGTTGGCAGTGGTGGACCCAAGGCTAGTTAGTGGTTATCCATTGACAAGTGTCATATACATGTTCAATATAGCTATGATGTGTGTTAAAGAAATGGGACCCGCTAGGCCTACCATGAGGGAAGTCGTTCATATGCTCTCAAATCCTCCCCACTCTACCACTCCCACTCACAACCTAATTAATCTCTAG 2811 0.5076 MRSCVCYTLLLFVSFTWLRVATCSSFSDMDALLKLKESMKKGEKAKDDALHDWKFSNSLSAHCSFSGVTCDQDFRVVAINVSFVPLFGHLPPEIGELDRLENLTIAQNNLTGELPKELTALTSLKLLNISHNVFSGDFPGGIILPMIELEVLDVYDNNFTGPLPEEFVKLEKLRYLKLDGNYFSGSIPESYSEFKSLEFLSLSTNGLSGKIPKSLSKLKTLRYLKLGYNNAYEGGIPAEFGTMKSLRYLDLSSCNLSGEIPPSLANLINVDTLFLQMNNLSGSIPSELSAMASLMSLDLSFNGLTGEIPVSFSRLRNLTLMNLFNNNLRGSLHPFVGELPNLETLQIWENNFSYVLPQNLGQNGKLKFFDVTKNHFTGLIPPDLCKSGRLQIFMITDNFFRGPIPNEIGNCKSLVKIRASNNYLNGAVPSGIFKLPSVKIIELANNGFNGELPPEISGDSLGILTLSNNLFSGRIPPALKNLRALQTLLLDANEFVGEIPGEVFDLPMLTTVNISGNNLTGAIPDTLTRCVSLNAVDLSRNMLAEEIPKGIKNLTDLSIFNVSRNQITGPVPEDIKFMLSLTTLDLSYNNFIGKVPTGGQFFVFSEKSFAGNPNLCTSHSCPSSSMALKKRRGPWSSKSTRLIVIVIALATVALLVAVTVYMMRRRKLHRAMTWKLTAFQRLNFKAEEVVECLKEENIIGKGGAGIVYRGSMPNGTDVAIKRLVGAGSGRNDYGFKAEIETLGKIRHRNIMRLLGYVSNKETNLLLYEYMPNGSLGEWLHGAKGGHLKWEMRYKIAVEAAKGLCYLHHDCNPLIIHRDVKSNNILLDADLEAHVADFGLAKFLYDPGASQSMSSIAGSYGYIAPELAQPSDAALVLAVVDPRLVSGYPLTSVIYMFNIAMMCVKEMGPARPTMREVVHMLSNPPHSTTPTHNLINL 936
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed2g2107 936 Pfam Protein kinase domain 694 868 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed2g2107 936 Gene3D Ribonuclease Inhibitor 27 143 IPR032675 -
Aed2g2107 936 PANTHER RECEPTOR PROTEIN KINASE CLAVATA1 869 927 - -
Aed2g2107 936 ProSitePatterns Serine/Threonine protein kinases active-site signature. 814 826 IPR008271 GO:0004672|GO:0006468
Aed2g2107 936 SMART serkin_6 693 934 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed2g2107 936 Pfam Leucine Rich Repeat 245 267 IPR001611 GO:0005515
Aed2g2107 936 SUPERFAMILY L domain-like 334 622 - -
Aed2g2107 936 Pfam Leucine Rich repeat 580 593 IPR001611 GO:0005515
Aed2g2107 936 Pfam Leucine rich repeat 484 543 IPR001611 GO:0005515
Aed2g2107 936 Gene3D Ribonuclease Inhibitor 385 621 IPR032675 -
Aed2g2107 936 SMART LRR_typ_2 291 315 IPR003591 -
Aed2g2107 936 SMART LRR_typ_2 482 506 IPR003591 -
Aed2g2107 936 SMART LRR_typ_2 435 459 IPR003591 -
Aed2g2107 936 SMART LRR_typ_2 339 363 IPR003591 -
Aed2g2107 936 SMART LRR_typ_2 243 267 IPR003591 -
Aed2g2107 936 Gene3D Ribonuclease Inhibitor 144 232 IPR032675 -
Aed2g2107 936 Gene3D Ribonuclease Inhibitor 233 384 IPR032675 -
Aed2g2107 936 Gene3D Transferase(Phosphotransferase) domain 1 770 873 - -
Aed2g2107 936 ProSiteProfiles Protein kinase domain profile. 693 936 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed2g2107 936 SUPERFAMILY Protein kinase-like (PK-like) 682 920 IPR011009 -
Aed2g2107 936 Pfam Leucine rich repeat N-terminal domain 27 71 IPR013210 -
Aed2g2107 936 Gene3D Phosphorylase Kinase; domain 1 657 769 - -
Aed2g2107 936 SUPERFAMILY RNI-like 79 401 - -
Aed2g2107 936 PANTHER UNNAMED PRODUCT 869 927 - -
Aed2g2107 936 PANTHER RECEPTOR PROTEIN KINASE CLAVATA1 5 867 - -
Aed2g2107 936 PANTHER UNNAMED PRODUCT 5 867 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed2g2107 Aed-Chr2 25220325 25223407 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed2g2107 23 926 Receptor kinase-like Gene Family AT1G75820 58.368 0.0 1113
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Aed2g2107 Pkinase 3e-32 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed2g2107 K00924 - gmx:732625 1610.12