Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed2g2103 ATGAAGGAAAAGAAAGACTTTTCTGAATTTGTGTCAGAGTTGATGGTTCTGGCCGATGAGGTTGCTTGGTTTGCTAAGAATCCAGAAACTGGGATAGAGGAGGATGCTTTTACTGAGTTTGCCATGATGGTTGAGAAACTCGCACCAATCTTCATTGATTTGAGAGACAAAAGCAAAATCATGGACAAGCCAGCTATTAGAAAGTGGTTGGAATCTCTTATGAATGAGCTTACCCGAGCTAAAGCTTTGATTAGAAGCTCTTCTTTGAAAGAGCGCAACAAACGAATCGAGGACATAGCGCATGATCTCGGTCGATCATTAGCCATGCTGCTTGTGGCCAGCCTTGAAGTGTCCACAGATTTCAGAGAAAAGATTGGTACATTGCAAAAACAGCTGATGAACGCGAGATTCGTCAATGAGGTGAACGTGGGAGGGGAGATAGAAGAGGAGATAATTAATGTTACTAGTGATGATGTTTTACTACAGCTTAAGAATGGTGATGCTGAAGAATTCTCACTTGCACTCTTAAGACTAAAGAAGTTCATCAGCTGTTGTTTAATCAATGTGGAAGCTGTTGTTTCGATTCTTATTAATCGTCTAAGTTCATGCAAAGCGGGAAATAGGTTGACAATCATTCATTTGCTAAGAAGTATTGCTTTGGGAAATGATGATACGAAGGTAAATACTATGCAGGAGAAGATGACAAATGATGTGTTGTTATCAGCAGTGGTGAAGTCTCTAACAAGAGACACTGAAGAGAGGAGGGAAGCAGTGGGACTGTTGCTAGAACTCTCTGACCTTTCTGCGGTTCGACGGAAGATTGGAATAATCCAAGGGTGTATTGTTATGTTAGTTTCTATCCTCAATGGAGTTGACCCTGTTGCTTCACGTGATGCAGCAAAGTTGTTGGATATACTGTCAAATAATACTCAGAATGCACTTCATATGGCTGAGGCTGGTTACTTTGGACCGCTAGTACGGTATTTGAATAAAGGTTCTGACATGACCAAGATCCTCATGGCAACAGCGCTTTCTAGGATGGTGCTCACTGATCATAGCAAACTCACCCTTGGACAAGATGGGGCAATTGAGGCCCTTGTGAAAATGTTCAATTCTGGGAAACTTGAGTCAAAGTTATCAGCTCTAAATGCACTGCAAAATCTTACCAGCTTGACAGAAAATGTGAAACGTTTGATCGGAACTGGAATTGTAGGATCTCTGCTGCAACTTCTTTTCTCTGTAACATCTGTACTCATGACTCTGCGGGAGCCTGCATCGGCTATTCTCGCAAGAATTGCAGAGTCAGAAACTGTTCTTGTTAATCAAGGTGTGGCTCAGCAGATGCTCTCACTTTTGAATCTTTCCAGCCCTATGGTACAAGGTCACCTACTAGAAGCTCTAAATAGCATTGCTGCTCATTCTTCTGCTTCAAAAGTGAGAAGAAAAATGAAGGAAAAAGGTGCACTTCAGCTAGTTTTACCCCTTCTGAAGGAATCAAAGATTAAGATAAGAAGCAAGGCATTGAATTTGCTGTATATTCTCTCTGAAGATCTAACAGATGAGTTGGCTGCACATTTTGATGAGACTCATCTATTTGATATTGTTAACATTGTCTTATTATCAACATCAGATACTGAAAAGGCTGCTGCTGTTGGCATACTGAGTAATCTTCCTGTTGGTGATAAAAAAGTGACAGATGCACTGAAGAGAGCGAATTTGTTGCCAATTTTGGTATCCATTATGGATTCAGGCACAGGAAGTAACTCGCCCGCAAAAATTATCTTAATGAAGAGTATTGCAGGTGTTGCAATTCGGTTCACAAGTTCCTCTGATAAGAAACTGCAACTTCTTTCGGCACAGCATGGAGTGATTCCTTTGCTTGTAAAACTGCTCTCAAGTGGTTCAGCAATCACAAAACTCAAAGCTGCAACCGCTCTCGCTCAACTATCACAGAATTCTCCATCTCTTAGGAGGTGTAGGAAGTCAAGGTGGTTGTGTGTTGCTCCCTCAGTGGATGCATATTGTGAGGTTCATGATGGTTACTGCTTTGTTAGCACCACATTTTGTCTGATCAAAGCAGGTGCTGTTTCTCCCCTTATCCAAATATTGGAAGATAAGGATTGGGAAGCAGTGGAAGCTGCTTTGAATGCCCTTTCAACTCTGTTGCAAGATGAAATCTGGGAAGGTGGTGCCAATTGCATAGCCAAATTGTCAGGTGTACAGGCTATTGTGAACATATTAGAAGCAGGTGACGGGAAGGTTCAAGAAAAAGCACTATGGATGTTGGAGAGAATATTTAGGGTTGAAGAACACAGAATGAAATATGGAGAATTATCTCAGGTGGTTCTTATTGATCTGGCACAGAGGAGTGATTCTAGATTGAAGTCCACAGTTGCAAAAGTTTTGGCAGTGCTGGAGCTCCTACTAGTTCAATCAAGTTATTTCTGA 2448 0.4146 MKEKKDFSEFVSELMVLADEVAWFAKNPETGIEEDAFTEFAMMVEKLAPIFIDLRDKSKIMDKPAIRKWLESLMNELTRAKALIRSSSLKERNKRIEDIAHDLGRSLAMLLVASLEVSTDFREKIGTLQKQLMNARFVNEVNVGGEIEEEIINVTSDDVLLQLKNGDAEEFSLALLRLKKFISCCLINVEAVVSILINRLSSCKAGNRLTIIHLLRSIALGNDDTKVNTMQEKMTNDVLLSAVVKSLTRDTEERREAVGLLLELSDLSAVRRKIGIIQGCIVMLVSILNGVDPVASRDAAKLLDILSNNTQNALHMAEAGYFGPLVRYLNKGSDMTKILMATALSRMVLTDHSKLTLGQDGAIEALVKMFNSGKLESKLSALNALQNLTSLTENVKRLIGTGIVGSLLQLLFSVTSVLMTLREPASAILARIAESETVLVNQGVAQQMLSLLNLSSPMVQGHLLEALNSIAAHSSASKVRRKMKEKGALQLVLPLLKESKIKIRSKALNLLYILSEDLTDELAAHFDETHLFDIVNIVLLSTSDTEKAAAVGILSNLPVGDKKVTDALKRANLLPILVSIMDSGTGSNSPAKIILMKSIAGVAIRFTSSSDKKLQLLSAQHGVIPLLVKLLSSGSAITKLKAATALAQLSQNSPSLRRCRKSRWLCVAPSVDAYCEVHDGYCFVSTTFCLIKAGAVSPLIQILEDKDWEAVEAALNALSTLLQDEIWEGGANCIAKLSGVQAIVNILEAGDGKVQEKALWMLERIFRVEEHRMKYGELSQVVLIDLAQRSDSRLKSTVAKVLAVLELLLVQSSYF 815
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed2g2103 815 Gene3D - 680 809 IPR011989 -
Aed2g2103 815 SMART arm_5 727 767 IPR000225 GO:0005515
Aed2g2103 815 SMART arm_5 476 516 IPR000225 GO:0005515
Aed2g2103 815 SMART arm_5 309 349 IPR000225 GO:0005515
Aed2g2103 815 SMART arm_5 683 723 IPR000225 GO:0005515
Aed2g2103 815 SMART arm_5 611 651 IPR000225 GO:0005515
Aed2g2103 815 SMART arm_5 228 266 IPR000225 GO:0005515
Aed2g2103 815 SMART arm_5 350 390 IPR000225 GO:0005515
Aed2g2103 815 SMART arm_5 432 472 IPR000225 GO:0005515
Aed2g2103 815 Gene3D - 353 663 IPR011989 -
Aed2g2103 815 SUPERFAMILY ARM repeat 159 413 IPR016024 -
Aed2g2103 815 PANTHER RING-TYPE E3 UBIQUITIN TRANSFERASE 2 815 - -
Aed2g2103 815 PANTHER ARMADILLO REPEAT-CONTAINING PROTEIN-LIKE 2 815 - -
Aed2g2103 815 SUPERFAMILY ARM repeat 359 770 IPR016024 -
Aed2g2103 815 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 361 403 IPR000225 GO:0005515
Aed2g2103 815 Gene3D - 157 352 IPR011989 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed2g2103 Aed-Chr2 25197171 25199846 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed2g2103 243 802 U-box Gene Family AT1G76390 29.022 4.54e-39 154
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed2g2103 K08332 - gmx:102659538 1307.35