Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed2g2101 ATGGCTTCTTCAAGTGGAACAACATCTTCAGGGTCAACTCTGCTTCAGAATTCTGGTTCTGAAGAAGATTTGCAGGCGGTGATGGATCAGAGGAAAAGGAAGAGAATGATATCGAACCGCGAATCTGCGAGGCGGTCTCGAATGAGGAAGCAGAAGCATTTGGACGATCTTGTTTCCCAAGTGGCTCAGCTGAGAAAAGAGAATCAACAGATACTCACAAGCGTTAACATGACGACGCAGCAGTACCTGAGCGTTGAGTCTGAGAACTCGGTGCTGAGGGCTCAGGTGGGAGAGCTGAGTCACAGGCTTGAATCTCTCAACGAGATCGTTCATGTGTTGAATGCCACAACTGGAGCAGCAGCATCCACCACCTTCAATATTGACCCAATATTAATGAATAATAATAATAGCTTCTTCAATCCGTTGAATATGGGTTATCTCAACCACCCTATCATGGCTTCTGCAGACATATTGCAACATATTCGCAAGTTGGTGTTGAATGGGTGTGGAGGTGGACAAAGTTGTATTCATTGGCAATAG 540 0.4556 MASSSGTTSSGSTLLQNSGSEEDLQAVMDQRKRKRMISNRESARRSRMRKQKHLDDLVSQVAQLRKENQQILTSVNMTTQQYLSVESENSVLRAQVGELSHRLESLNEIVHVLNATTGAAASTTFNIDPILMNNNNSFFNPLNMGYLNHPIMASADILQHIRKLVLNGCGGGQSCIHWQ 179
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed2g2101 179 PANTHER BZIP TRANSCRIPTION FACTOR 1 158 - -
Aed2g2101 179 CDD bZIP_plant_GBF1 32 82 IPR045314 GO:0003700|GO:0006355
Aed2g2101 179 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 29 92 IPR004827 GO:0003700|GO:0006355
Aed2g2101 179 Pfam bZIP transcription factor 31 89 IPR004827 GO:0003700|GO:0006355
Aed2g2101 179 Coils Coil 47 74 - -
Aed2g2101 179 MobiDBLite consensus disorder prediction 1 50 - -
Aed2g2101 179 MobiDBLite consensus disorder prediction 1 24 - -
Aed2g2101 179 SUPERFAMILY Leucine zipper domain 31 83 IPR046347 GO:0003700|GO:0006355
Aed2g2101 179 Gene3D - 29 84 - -
Aed2g2101 179 PANTHER BZIP TRANSCRIPTION FACTOR 44 1 158 - -
Aed2g2101 179 MobiDBLite consensus disorder prediction 25 50 - -
Aed2g2101 179 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 34 49 IPR004827 GO:0003700|GO:0006355
Aed2g2101 179 SMART brlzneu 27 91 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed2g2101 Aed-Chr2 25174962 25176017 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed2g2101 25 160 bZIP Transcription Factor Family AT4G34590 53.237 1.02e-45 146
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Aed2g2101 bZIP_1 1.2e-10 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed2g2101 K25786 - gmx:100101862 250.751