Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed2g2082 ATGTTGCATTGTCTGAACACTTCGGGGAATCTAGGAGCGAGCTGTTCGGACATGACAGTGTTGGAAAGACAACGGGAAGCTACCATCGTCAAGTGGCAACACCACCAATCGCCATACAACTTAACGGACTTTAACGTCATTTGCGCTGCTGATTCTGCGCTCGGCGAGGTCCTCACTCACTCCGTCAAACCCGACCCGAGTGTGTGGCCTGAATTTCACACCGGTTTGCTACCCGCCATTTCGAGAACTTGTAGCAGAGACGGAGACTTGGTTTCACTTTCACCCACTGCCACTGCCACTGCCACTGGAAAAGAAAACAACACTAAGAAGAGAAAGCCACCTCATAACAATAACAACTCCAAGGTTGTTGCGGAGAGTTGTGATAATAACAAGGACAAGAGAGTCAAAGTTAGTGGCGAATTAGAAGGAGAATCCAAAGTTAGAAGGGAGAAGATTAGCGAGAGAATGAAGTATTTGCAAGATTTAGTACCGGGTTGCAACAAAATTGCAGGGAAAGCTGGAATGCTTGATGAAATTATTAACTATGTTCAGTCCCTTCAACGCCAAGTTGAGTTCTTGTCAATGAAATTAGCGGCTATAAATCCAAGGCTTGACTTCAACATTGACGACCTGTTTGCCAAAGAGGTGTTTCCTCAAAGTTTTCCAAACATGGGGATGATGGCATCAGATATGAGTATGATCAGTAACAACGTTAACCCGGCGTATCTTCAGTTCAATTCAGCGCAGGCGCAGCAACTTGTATCGTGCTGTGGTGGATTAATAAACAACATGGGAATAAACCCTCCCAATATGGGGCTTCGAAGGAACATTAGTACCAATGCTACTAGCCCTGTACATTTGCCCGAAACGTTTCTTGATTCCTCCTGTTTCACTCAAATTCTACCCTCCTCAAATTGGGAAGGTGATTTCCAAAGCCTTTACAACGTTGCTTTTGATCAAGGCCGAACAGCTTCATCATCATCCTTTCCTTCTCAGCCATTTACAGGTCTAGTTGAAGCTAGCAATCTAAAGATGGAGATGTAA 1044 0.4473 MLHCLNTSGNLGASCSDMTVLERQREATIVKWQHHQSPYNLTDFNVICAADSALGEVLTHSVKPDPSVWPEFHTGLLPAISRTCSRDGDLVSLSPTATATATGKENNTKKRKPPHNNNNSKVVAESCDNNKDKRVKVSGELEGESKVRREKISERMKYLQDLVPGCNKIAGKAGMLDEIINYVQSLQRQVEFLSMKLAAINPRLDFNIDDLFAKEVFPQSFPNMGMMASDMSMISNNVNPAYLQFNSAQAQQLVSCCGGLINNMGINPPNMGLRRNISTNATSPVHLPETFLDSSCFTQILPSSNWEGDFQSLYNVAFDQGRTASSSSFPSQPFTGLVEASNLKMEM 347
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed2g2082 347 PANTHER STEROL REGULATORY ELEMENT-BINDING PROTEIN 146 325 IPR024097 GO:0006355
Aed2g2082 347 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 146 205 IPR036638 GO:0046983
Aed2g2082 347 Gene3D - 144 206 IPR036638 GO:0046983
Aed2g2082 347 MobiDBLite consensus disorder prediction 95 128 - -
Aed2g2082 347 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 136 186 IPR011598 GO:0046983
Aed2g2082 347 PANTHER TRANSCRIPTION FACTOR BHLH63-LIKE 146 325 - -
Aed2g2082 347 SMART finulus 146 192 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed2g2082 Aed-Chr2 25071651 25074541 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed2g2082 146 249 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G34530 62.281 3.64e-38 137
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Aed2g2082 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed2g2082 - - gmx:100794256 439.113