Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed2g2077 ATGTTTAATTCATGTCAAAAACACTACAACCTCTACCTTCCATGCTCCTCTGTTCCCCTGCGCAATTCAACAACACGCTGCACCATTTTCAATTGTCAAAACAACCCAAACGAGCATCATTCCTTTCTCCGCAAACACAATTCCAAATCCACAGCGTATCTCCTTCACCACCTATCCCACAAGGATGATGGGGTATCCATTCCCATTCCTAAAGACCCAATGCCCCACGAAGATAAAGTCAAGGTTTTGGAGCTTTCCCTCGTCAGGAAAAGAACCCCTCAGTTCCCTGGCTCCATCTACGCTCAATCTCCCAGCGACCCCGATGTGGGTTCTTCTCTGCCCCCTCTCCGCACTCTGTTTCACTCAACTCCGGACACTGATGATAGAGATGAGGAGGAGATGATAATGCGCGCTCTCGAGATTCGCAGGAAGGTCACTGAAGAGGTTTTCAAAGAAGCCATGCGAAAGGGAAAGTTTGGAATCACTTACACTACCAATTTGGTTACCAGGTTATCTGGTTTCATTGATTACATCATGATTGAAGCTGCTAACTTGAAGAGATTGCCCCAATATTCTAACTCCACCTTCAATTTACGCGCCAAAACTGTCATCGATGACTCTAAAGTTGTGCCACTTATTAGATGGTTGAAGCACAATGCACTATCGTATCCTCGGACAGCGAAGCTTATTTTGATGTCAGGAGGAAAACTCGAGTCCATAAAGAGTTTTGTCGAGTGGTTGAAATTGGTACATGTGAAAGGAGAGTTTCTTGGTGTTGTAATGTTGAATGCTGGAGAGGATATTTTGCAGCGCAGCCATGCGGAGCTGGATGAGATAGTTCTGTATTTGGAGTCCAATGGAGTCAGGAGGGAATGGATGGGCTATGTCATTAGTCGTTGTCCTCAGTTATTGTCTTATAGCTTAGATGAAGTGAAGACTCGTGCACAGTTCTTTCATGATATGGGCTTAAATGAGAAGGATTTTGGCACAATGGTTTTTGATTTTCCTAAAGTTCTTGGTTACTATTCTCTGGAAGAAATGAATGCAAAGGTTAATTATTTAAAAGAATTCGGGCTTCAAAGTAAAGATGTTGGCAGATTGCTTGCATTTAGACCACAGTTGATGGCGTGCAGCATTGAAGAACAATGGAAGCCTCTTGTTAAGTATCTGTATTATTATGGGATCACTCAAGATGGTATGAGGAGAATGCTTACCATTAAACCAATGGTCTTTTGTGCTGATTTGCAGATGACTATTGTGCCAAAGGTGCGGTTTTTTGAGGATTTAGGGGTTCACAATGATGCAATTGGCAACATGCTTGTGAAGTTTCCTCCTCTACTTACTTACAGTCTGAACAAGAAGATTAGACCAGTGGTCATATTCTTGATGACCAAAGCTGGAGTGAGTGAGAAAGATATTGGCAAGGTTGTAGCTCTTGGACCTGAGCTCTTGGGATGCAATATAACACATAAGCTTGATGTAAATGTAAAATATTTTTTGTCTCTTGGCATACGACTTTGGCAATTGGGTGAGATGATTGCTGATTTCCCAATGCTGCTCAGATACAATCCAGATGTCCTGCGTCCCAAGTATATTTATTTGCGGAGAACCATGGTCCGGCCTTTGCAAGACATCATTGAGTTTCCAAGGTTTTTCAGCTATTCTCTTGAGGGTCGAATTATGCCTAGACACAAGGTTCTAGTGGAGAATCAGATTAATATTAAGCTGAGATACATGTTGACTAGCACTGACGAAGAATTCAACAAAATGGTCAAGGGCTTAATTAGAAAGCGCCTCAGATTTGAATCTGCTGTCACAAATGAGGAGGATACTACTCATCCCCAATCTGTTATTAGTGCAGAAGATATTACTACACCCCTGGCATAA 1887 0.4234 MFNSCQKHYNLYLPCSSVPLRNSTTRCTIFNCQNNPNEHHSFLRKHNSKSTAYLLHHLSHKDDGVSIPIPKDPMPHEDKVKVLELSLVRKRTPQFPGSIYAQSPSDPDVGSSLPPLRTLFHSTPDTDDRDEEEMIMRALEIRRKVTEEVFKEAMRKGKFGITYTTNLVTRLSGFIDYIMIEAANLKRLPQYSNSTFNLRAKTVIDDSKVVPLIRWLKHNALSYPRTAKLILMSGGKLESIKSFVEWLKLVHVKGEFLGVVMLNAGEDILQRSHAELDEIVLYLESNGVRREWMGYVISRCPQLLSYSLDEVKTRAQFFHDMGLNEKDFGTMVFDFPKVLGYYSLEEMNAKVNYLKEFGLQSKDVGRLLAFRPQLMACSIEEQWKPLVKYLYYYGITQDGMRRMLTIKPMVFCADLQMTIVPKVRFFEDLGVHNDAIGNMLVKFPPLLTYSLNKKIRPVVIFLMTKAGVSEKDIGKVVALGPELLGCNITHKLDVNVKYFLSLGIRLWQLGEMIADFPMLLRYNPDVLRPKYIYLRRTMVRPLQDIIEFPRFFSYSLEGRIMPRHKVLVENQINIKLRYMLTSTDEEFNKMVKGLIRKRLRFESAVTNEEDTTHPQSVISAEDITTPLA 628
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed2g2077 628 SMART mt_12 474 505 IPR003690 GO:0003690|GO:0006355
Aed2g2077 628 SMART mt_12 329 360 IPR003690 GO:0003690|GO:0006355
Aed2g2077 628 SMART mt_12 294 324 IPR003690 GO:0003690|GO:0006355
Aed2g2077 628 SMART mt_12 365 396 IPR003690 GO:0003690|GO:0006355
Aed2g2077 628 SMART mt_12 401 432 IPR003690 GO:0003690|GO:0006355
Aed2g2077 628 SMART mt_12 437 469 IPR003690 GO:0003690|GO:0006355
Aed2g2077 628 SMART mt_12 542 573 IPR003690 GO:0003690|GO:0006355
Aed2g2077 628 SMART mt_12 510 540 IPR003690 GO:0003690|GO:0006355
Aed2g2077 628 MobiDBLite consensus disorder prediction 608 628 - -
Aed2g2077 628 PANTHER TRANSCRIPTION TERMINATION FACTOR MTERF2, CHLOROPLASTIC 62 611 - -
Aed2g2077 628 MobiDBLite consensus disorder prediction 96 115 - -
Aed2g2077 628 PANTHER CGI-12 PROTEIN-RELATED 62 611 IPR003690 GO:0003690|GO:0006355
Aed2g2077 628 Pfam mTERF 352 587 IPR003690 GO:0003690|GO:0006355
Aed2g2077 628 Pfam mTERF 233 355 IPR003690 GO:0003690|GO:0006355
Aed2g2077 628 Gene3D Transcription termination factor 3, mitochondrial 371 595 IPR038538 -
Aed2g2077 628 MobiDBLite consensus disorder prediction 606 628 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed2g2077 Aed-Chr2 25040691 25044997 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Aed2g2077 mTERF 6.3e-64 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed2g2077 K15032 - mnt:21401514 845.114