Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed2g2072 ATGACAGAGTCGTCAGGCCCAAGTGTGAGTTTGAAGCTTCTCGCGTTAGTAGCTATTTTAGTTCTCTTCGCGGTGGTAATTGTGCTTCTGGTCTTCTTCCTCTGCTTCCGCGGCAGCCGGAGCTGCAGGAAGCGGAACATGGCGGCGAAACACAGCTCCGGGAGTATCCCTCTGGTGTCGAAAGAGATCAACATGGTGAAGGCGTCGACGAGCGAGATGACAGGTGATGATGACGTGGACGGTGATCCGAAGAAGGAGGCGGAGATCAAAGTCGAAATTGGTGGGGCCCAGCGCAGCGAAGTGTCGGTGGAGGATCCGGATATTGGGTGGGGCCGCTGGTACAGCATTAGAGAAGTGGAACTCGCCACACGCGGCTTTTCGGAAGCGAATGTTATTGGGGAAGGAGGCTACGGCATTGTCTACAGAGGAGTAATGCACGATGCTTCCGTCGTGGCTGTCAAGAATCTTCTCAACAACAAGGGTCAAGCTGAGAAAGAGTTTAAGGTAGAGGTTGAAGCTATTGGAAAAGTAAGGCATAAGAATTTGGTTCGTTTGGTAGGATATTGTGCAGAAGGTGCTCGAAGGATGCTTGTTTATGAGTACGTTGACAACGGAAATTTGGAGCAGTGGCTGCATGGTGATGTTGGACCAATTAGCCCCTTGACATGGGATGTTCGAATGAGAATTGCTATTGGGACTGCAAAAGGAAACACCTTGAAATCTGTCTTAACTCTTAACTATGTTTATGTTGATGTGCCTCAGATGAATTTGGTTGATTATTTTAAGGCAATGGTAGCAAGTCGTCGCAGTGACGATCTAGTTGATCCTTTAATTGAGATTCCACCCTCTCCAAGATCCTTGAAGCGAGTTTTACTGATCTGCCTGCGCTGTATAGACTTGGATGTTGTTAAGCGACCAAAGATGGGTCAAATTGTTCATATGCTTGAGACAGATGATTTCCCCTATCGTTCTGAGCTACGTACAGTAAGAGAAAAAGATCCTGTGCCTTCCCATGCAGATGTTTCCATTAAAGTTCCTCATCTACCACCAAAGAATGCAGAAACCGTAGAAAAATCAAGATGGAGATAG 1089 0.472 MTESSGPSVSLKLLALVAILVLFAVVIVLLVFFLCFRGSRSCRKRNMAAKHSSGSIPLVSKEINMVKASTSEMTGDDDVDGDPKKEAEIKVEIGGAQRSEVSVEDPDIGWGRWYSIREVELATRGFSEANVIGEGGYGIVYRGVMHDASVVAVKNLLNNKGQAEKEFKVEVEAIGKVRHKNLVRLVGYCAEGARRMLVYEYVDNGNLEQWLHGDVGPISPLTWDVRMRIAIGTAKGNTLKSVLTLNYVYVDVPQMNLVDYFKAMVASRRSDDLVDPLIEIPPSPRSLKRVLLICLRCIDLDVVKRPKMGQIVHMLETDDFPYRSELRTVREKDPVPSHADVSIKVPHLPPKNAETVEKSRWR 362
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed2g2072 362 Gene3D Transferase(Phosphotransferase) domain 1 238 328 - -
Aed2g2072 362 ProSiteProfiles Protein kinase domain profile. 126 362 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed2g2072 362 PANTHER RECEPTOR-LIKE KINASE 254 362 - -
Aed2g2072 362 Pfam Protein tyrosine and serine/threonine kinase 130 236 IPR001245 GO:0004672|GO:0006468
Aed2g2072 362 Gene3D Phosphorylase Kinase; domain 1 96 201 - -
Aed2g2072 362 PANTHER RECEPTOR-LIKE KINASE 1 238 - -
Aed2g2072 362 SUPERFAMILY Protein kinase-like (PK-like) 104 323 IPR011009 -
Aed2g2072 362 MobiDBLite consensus disorder prediction 331 362 - -
Aed2g2072 362 ProSitePatterns Protein kinases ATP-binding region signature. 132 154 IPR017441 GO:0005524
Aed2g2072 362 PANTHER OS01G0323000 PROTEIN 1 238 - -
Aed2g2072 362 PANTHER OS01G0323000 PROTEIN 254 362 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed2g2072 Aed-Chr2 25017015 25020951 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed2g2072 4 266 Trihelix Transcription Factor Family AT1G70460 35.507 8.25e-38 142
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-V Aed2g2072 PK_Tyr_Ser-Thr 6.7e-16 CL0016