Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed2g2054 ATGGGAAACAATTGTGTCGGATCGAAAACCTCGAACGATGCACTATTTCCCCATGTTCTTCCGAGTTCATTCTGGTGGCTTCATCAAACGAGTGTCACACAAATTTCTGATGCACCTTCCCTCGTGACTGATATTCAAGATACAAACTTTCTAGAGAATGTTCAAGAAAAGCCTCCACGTGTAGTGAAAATTAAAAACGAGGAGATGAAGCTAAAACCAGTTCCTCTTCAACCCAACAAACACGACAAAGAGACTAACATGCCTTCAGAGGAACAACAACAACAAACAAGGCACATGCAAAAAATGCCTCGTAAGGTTAAGAATACTCTAGCAAAAGGGCTTCAAGCAGAGTCAATTTTGAAGAGAAAAAGTGGTCACTTTAAGGAGTACTACAATTTGGGACAAGAGCTTGGGAAGGGGCAATATGGAACAACATTCCTATGCACTGAGAAAGCCACTGGGAAAAAGTATGCATGCAAGTCAATTCCAAAAGTGAAATTGGCTATGGATGATGACGTGGAGGATGTGAGGAGGGAGATTGAGATAATGCATCACTTGGAGGGGTGTCCTAATGTGATATCAATCAAAGGGGCTTATGAGGATGGTGTTGCTGTTTATGTTGTGATGGAGTTATGTGGAGGGGGTGAACTCTTTGATAGGATTGTTGAAAAGGGACACTACACAGAGAGAAAAGCAGCAAAACTTGCAAGGACTGTAGTTGGTGTTATAGAGAGGTGTCACTCCCTTGGAGTGATGCATCGTGATCTCAAGCCTGAGAATTTTCTTTTGTTGATGGGAGTGAAGACTCTTCTACTCTTAAGGCCATTGATTTTGGATTGA 840 0.4202 MGNNCVGSKTSNDALFPHVLPSSFWWLHQTSVTQISDAPSLVTDIQDTNFLENVQEKPPRVVKIKNEEMKLKPVPLQPNKHDKETNMPSEEQQQQTRHMQKMPRKVKNTLAKGLQAESILKRKSGHFKEYYNLGQELGKGQYGTTFLCTEKATGKKYACKSIPKVKLAMDDDVEDVRREIEIMHHLEGCPNVISIKGAYEDGVAVYVVMELCGGGELFDRIVEKGHYTERKAAKLARTVVGVIERCHSLGVMHRDLKPENFLLLMGVKTLLLLRPLILD 279
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed2g2054 279 SMART serkin_6 131 277 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed2g2054 279 PANTHER SERINE/THREONINE-PROTEIN KINASE 68 266 - -
Aed2g2054 279 MobiDBLite consensus disorder prediction 74 103 - -
Aed2g2054 279 MobiDBLite consensus disorder prediction 74 88 - -
Aed2g2054 279 Pfam Protein kinase domain 131 263 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed2g2054 279 ProSiteProfiles Protein kinase domain profile. 131 279 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed2g2054 279 PANTHER CALMODULIN-DOMAIN KINASE CDPK PROTEIN 68 266 - -
Aed2g2054 279 ProSitePatterns Protein kinases ATP-binding region signature. 137 160 IPR017441 GO:0005524
Aed2g2054 279 ProSitePatterns Serine/Threonine protein kinases active-site signature. 251 263 IPR008271 GO:0004672|GO:0006468
Aed2g2054 279 SUPERFAMILY Protein kinase-like (PK-like) 129 263 IPR011009 -
Aed2g2054 279 Gene3D Transferase(Phosphotransferase) domain 1 208 270 - -
Aed2g2054 279 Gene3D Phosphorylase Kinase; domain 1 109 207 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed2g2054 Aed-Chr2 24879989 24883877 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed2g2054 52 264 EF-hand Containing Proteins AT3G10660 59.174 8.55e-84 262
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Aed2g2054 Pkinase 5.4e-35 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed2g2054 K13412 - gmx:100793377 454.136