Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed2g2035 ATGGCGACATACTTTCATCATGGTAACTCCGAAATCCAATCAGGTGCCGCCGACGGGCTCCAAACTCTTGTCCTCATGAACCCCGGCTACATCCACTACTCTGACGCGCCACCGCAGCCGCCACCGTCGCACCACGCCACGGGAAACCTCGTGTTTCTCAACCCCGCCGCGGTTGCAGGTGGCAACAACAACTCGTTTAGCCCCCACGCGCCGCAGTCTCACTCTCACACCCAACAGTTCGTTGGAATACCTCTTCCCAATTCCCAAGACCTCAACCACCACTCCATGCACGCGCACCATGACGTCTCGGCCCTGCATGGCTTCATGCCTCGCATGCAGTACAATCCCTGGAACGCGCTTGACCCGGCCTCGGCGGCGCGTGAAACGCCACGCGCACAGCAGGGGCTGTCTTTAGGGCTGGGGTCGTTTCGGGAGGGTCAGGCACCGGCCATGTCCGGCGACGAGCTGCGCGTGTCGGGCGGGTCGCCGTCGTCGGCTTCTGGGGTTACTCACAATAATGGAGCTTCGGGCATTCAGAACGTGCTTTTGAGCTCAAAGTACTTGAAAGCAGCGCATGAGCTTCTAGAAGAGGTTGTGAATGTTAACAATGGGATTGGCAGTGAGTTGGGGAAAAAGAGTGGTGGGGGACAGACCAAGGTGATTGGAGAATCATCCGCAGCAGGTAGTGGAGATGGTAATTCAGTTGGCGGCGATGGGAACGGAAAGCGTAGCTCTGAACTATCAACTGCAGAAAGACAAGAAATTCAGATGAAGAAAGCCAAGCTAATTGGCATGCTTGATGAGGTGGAGCAAAGGTACAAGCAGTACCACCAGCAGATGGAGATAGTGGTTTCATCGTTTGAGCAAGCTGCGGGGATTGGTTCAGCGAGGACATACACTGCGCTTGCATTGCAAACAATCTCGAAGCAGTTTCGGTGTTTGAAAGATGCGATTTCAGGGCAAGTTAGAGCTGCTAATAAGAGCTTAGGAGAAGAGGATTGCTTTGGAGGGAAAATGGAAGGTTCTCGACTCAAATATGTTGACCATCATCTTCGTCAACAGCGAGCACTCCAACAGTTGGGAATGATCCAGCACAATGCTTGGAGACCCCAGAGAGGATTGCCTGAAAGATCCGTTTCTGTTCTTCGTGCTTGGCTCTTCGAACACTTCCTCCACCCTTATCCTAAGGATTCGGACAAGCACATGCTTGCAAAACAAACAGGGCTAACTAGGAGCCAGGTTTCAAATTGGTTTATAAATGCTCGAGTTCGTCTTTGGAAGCCAATGGTGGAGGAAATGTACTTGGAGGAGATAAAGGATCATGAACAGAATGAGTCTGAGGATAAATCAAGCAAGAGCAATAATAATGAAGATTCTGGTTCGAAAATGTCAGCCCCACAAGAGAAAGGTCCTTCCAATGAAACCGAAGCAAAGAGTTTCAATTCCAAACAAGAGGTTTCTAAGAGCCAGAACAACACTGCTATGGTTTCAGTTTCAACATCACCACTACTTGGTGTGAATGTGAGAAACAACCAATCAGGATTCAGCTTCATGGGGTCATCAGAGCTAGATGGGATCACACAAGGAAGTCCAAAGAAACCAAGGAGCCATGAGATGATGATTCATTCCCCAAATAGTACTGTCCCTTCAATGAACATGGATGTGAAGCCCAATGATGCAAACATTGATCAGCTCTCAATGAAATTTGGAGATGAAAGGCAAGGAAGAAATGGGTCCTCTAATTTCATGGGAAACCAAACAAACTTCATCAGTGGTTTTGGACAGTACCCAATTGGTGATATTGGAAGGTTTGATGCAGAGCAATTCACACCAAGGTTTTCAGGTAATGGTGTTTCCCTCACTCTTGGTCTTGACTCATTACCAGGAACACATAATCAAACATTTCTACCAAACCAAAACATTCAACTTGGAAGAAGCCTTGACATTGGTGAACCAAATGAGTTTGGTGCCATAAACACTTCCTCTCCTCACTCTACAGCTGCTGCTTATGAGAGTATGAGCATGCAAAACCCAAAGAGGTTTGCTGCACAATTGTTGCCAGACTTTGTCACCTAA 2076 0.4865 MATYFHHGNSEIQSGAADGLQTLVLMNPGYIHYSDAPPQPPPSHHATGNLVFLNPAAVAGGNNNSFSPHAPQSHSHTQQFVGIPLPNSQDLNHHSMHAHHDVSALHGFMPRMQYNPWNALDPASAARETPRAQQGLSLGLGSFREGQAPAMSGDELRVSGGSPSSASGVTHNNGASGIQNVLLSSKYLKAAHELLEEVVNVNNGIGSELGKKSGGGQTKVIGESSAAGSGDGNSVGGDGNGKRSSELSTAERQEIQMKKAKLIGMLDEVEQRYKQYHQQMEIVVSSFEQAAGIGSARTYTALALQTISKQFRCLKDAISGQVRAANKSLGEEDCFGGKMEGSRLKYVDHHLRQQRALQQLGMIQHNAWRPQRGLPERSVSVLRAWLFEHFLHPYPKDSDKHMLAKQTGLTRSQVSNWFINARVRLWKPMVEEMYLEEIKDHEQNESEDKSSKSNNNEDSGSKMSAPQEKGPSNETEAKSFNSKQEVSKSQNNTAMVSVSTSPLLGVNVRNNQSGFSFMGSSELDGITQGSPKKPRSHEMMIHSPNSTVPSMNMDVKPNDANIDQLSMKFGDERQGRNGSSNFMGNQTNFISGFGQYPIGDIGRFDAEQFTPRFSGNGVSLTLGLDSLPGTHNQTFLPNQNIQLGRSLDIGEPNEFGAINTSSPHSTAAAYESMSMQNPKRFAAQLLPDFVT 691
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed2g2035 691 SMART HOX_1 368 432 IPR001356 GO:0003677
Aed2g2035 691 MobiDBLite consensus disorder prediction 440 455 - -
Aed2g2035 691 PANTHER HOMEOTIC PROTEIN, PUTATIVE-RELATED 9 634 - -
Aed2g2035 691 MobiDBLite consensus disorder prediction 145 174 - -
Aed2g2035 691 SUPERFAMILY Homeodomain-like 369 434 IPR009057 -
Aed2g2035 691 MobiDBLite consensus disorder prediction 456 493 - -
Aed2g2035 691 Pfam Homeobox KN domain 385 424 IPR008422 GO:0003677|GO:0006355
Aed2g2035 691 SMART prehox3 176 320 IPR006563 -
Aed2g2035 691 MobiDBLite consensus disorder prediction 440 493 - -
Aed2g2035 691 Pfam Associated with HOX 181 319 IPR006563 -
Aed2g2035 691 MobiDBLite consensus disorder prediction 158 174 - -
Aed2g2035 691 Gene3D - 364 442 - -
Aed2g2035 691 ProSiteProfiles 'Homeobox' domain profile. 365 428 IPR001356 GO:0003677
Aed2g2035 691 MobiDBLite consensus disorder prediction 207 250 - -
Aed2g2035 691 PANTHER HOMEOBOX PROTEIN TRANSCRIPTION FACTORS 9 634 - -
Aed2g2035 691 CDD homeodomain 368 429 IPR001356 GO:0003677
Aed2g2035 691 Coils Coil 252 279 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed2g2035 Aed-Chr2 24765863 24770194 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed2g2035 1 690 Homeobox Transcription Factor Family AT2G35940 49.866 6.47e-180 526
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-BELL Aed2g2035 POX 1.3e-47 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed2g2035 - - gmx:100810901 1160.98
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed2g2035 2 24765863 24770194 Aed2g2035 2 24765863 24770194 ECH
Aed2g2035 2 24765863 24770194 Aed8g0613 8 5257143 5263116 PCT