Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed2g2031 ATGCTCCTAACACTCCTCCTCGCCCTCCTTCTCTTTCACCAGAGCGCCGCCGACCCAAACGACGCCAAAATCCTGCGGCAATTCCGAAACGGGCTAGACAACCCAGAGCTTCTGCCGTGGCCGGACGAGGGTGGCGACGATCCATGCGGCTGGAAGTACATTTTCTGCGACAGCGACAAACGCGTGAACCAGATTCAAGCCAAGGGCTTAAACCTCAGCGGCCCCTTGCCGCAGAACCTGAACCAGCTCACCACGCTCTTCAACGTGGGCCTCCAGAATAACAGGCTCAACGGCCCATTACCCTCCTTCAGCGGCCTCTCCAGTCTCAAATATGCCTACCTCGACAACAACAACTTCGACTCCATCCCTTCCGATTTCTTTGACAGCCTCCAGAGTCTCGAAGTCTTGGCCTTGGACCACAATAACCTCAACGCCACCACTGGTGGATGGCACTTACCGGAAACGCTCCAGGGGTCAACGCAGTTGACCAATTTCTCTTGTATGGGCTGCAACCTCGCCGGCCCTATACCCGAATTTCTCGGCACCATGAACTCGCTCTCGTTTTTGAAGCTTTCCAACAACAACTTAACGGGGGAGATTCCGAGGAGTCTCAACGGCTCAGCGCTGCAGTTTCTGTGGTTGAATAATCAACAAGGGGAAGGCCTCAGTGGGGGAATTGAAGTTGTGGCTACTATGGTTTCGCTCACCAGTTTGTGGCTTCACGGAAACGCTTTCACTGGGGCAATTCCCGACAACATTGGGGATTTGAGTTCTCTGAAGGATCTCAACCTCAATGGGAACAACCTCGTTGGCTTGCTTCCTCAAGGTTTGGGTGACATGAAGCTCGACAACCTGGATTTGAACAATAACCATTTTATGGGTCCGATTCCGAATTTTAAGGCTGCTACGGTGTCCTATGATTCTAATGATTTCTGTGTTAGCAAACGGGGGGTTCCTTGTTCGTTTGAGGTGATGGCGCTGTTGGGGTTTCTTGGTGGCTTGAATTATCCTCAGAATTTGGTTAATTCCTGGACTGGGAATGATCCTTGTGGGGGGAATTGGTTGGGGATAAAGTGTGATATTGATGGGAAGGTGAATATGATTAATTTGCCTAATTTGAATCTTAGTGGGAGTTTAAGTTCTTCTGTTGCGAACTTGGGTTCTCTTGCTGCGATTAGGTTGGCGGGGAATGATATCAGTGGTGTGGTGCCTGGTAATTGGAGTAGTTTGGCATCTTTGAAATTGTTGGATCTGAGTGGGAATAACATTTCTCCTCCACTGCCTGACTTTAAGACTGGATTAAAACCTATTATTGTGGGGAATCCTCTGCTGAATGGTGGAGGAGCGAAAACTACTCCTTTAGGGAGCAATAGCCCATCATCTGGATCTGGGAATGTTGACCCTTCAGGGAACGGTGACTTGAATTCTAGTTTGAGTGATTCTCATGAAATAAAGAAATCCAAGAGGAAAGAGTTGGTTTCAATTGTGGCTCCAATTGCAGGTGTGGCGGCTGCGGCTTTTCTGCTCATTCCACTCTACGCATATTGTTTCAGGAGAAGGAAGGGTGGCTTCAAGTCCCCAACTTCACTGGTAATTCATCCCAGAGATCCATCGGATTCGGATAGTGCTGTGAAGATTGTTGTTGCCAATAATACCAATGGAAGCATTTCCACTTTGACAGGGAGTGGGTCTGGGAGTAGGAATAGTAGTGGAACTGGGGAGTCTCATGTCATTGAAGCTGGAAATCTTAGGATATCAGTCCAGGTTCTGAGGAATGTGACCAAGAATTTCGCACCCGAGAATGAGCTTGGCCGTGGCGGATTTGGTGTTGTTTATAAGGGGGAGTTGGATGATGGAACTAAAATTGCAGTGAAACGAATGGAAGCAGGTGTGATTACTAGCAAGGCCTTGGATGAATTCCAGTCTGAGATTGCAGTTCTATCGAAAGTGAGGCACCGGCATTTGGTGTCTCTTTTGGGTTATTCTATAGAGGTGACAGGAAAAATCACTACCAAAGCAGATGTTTTCAGTTTCGGGGTTGTGCTAATGGAGCTGTTGACTGGATTGATGGCGCTTGATGAGGGTAGACCAGAGGAAAGCCAATACTTGGCAGCTTGGTTCTGGCGTATAAAATCAGATAAGAAGAAACTAATGGCTGCTATTGACCAGGTTCTTGATGTAAAGGAAGAAACATTTGAGAGCATTTCCATCATTGCCGAGCTAGCAGGGCACTGCACTGCCAGAGAACCAAGCCAACGGCCAGATATGGGTCATGCCGTGAATGTTCTGGCACCGCTTGTCGAGAAATGGAAACCCTTTGATGGTGACACCGAGGAGTATTCCGGCATTGATTATAGCCTTCCCCTTAATCAGATGGTGAAGGGATGGCAAGAGGCAGAAGGAAAGGACATGAGTTATATGGACCTAGAAGACAGTAAGAGTAGTATCCCTGCAAGGCCTACTGGATTTGCAGATTCTTTTACTTCAGCTGATGGCCGGTGA 2502 0.4824 MLLTLLLALLLFHQSAADPNDAKILRQFRNGLDNPELLPWPDEGGDDPCGWKYIFCDSDKRVNQIQAKGLNLSGPLPQNLNQLTTLFNVGLQNNRLNGPLPSFSGLSSLKYAYLDNNNFDSIPSDFFDSLQSLEVLALDHNNLNATTGGWHLPETLQGSTQLTNFSCMGCNLAGPIPEFLGTMNSLSFLKLSNNNLTGEIPRSLNGSALQFLWLNNQQGEGLSGGIEVVATMVSLTSLWLHGNAFTGAIPDNIGDLSSLKDLNLNGNNLVGLLPQGLGDMKLDNLDLNNNHFMGPIPNFKAATVSYDSNDFCVSKRGVPCSFEVMALLGFLGGLNYPQNLVNSWTGNDPCGGNWLGIKCDIDGKVNMINLPNLNLSGSLSSSVANLGSLAAIRLAGNDISGVVPGNWSSLASLKLLDLSGNNISPPLPDFKTGLKPIIVGNPLLNGGGAKTTPLGSNSPSSGSGNVDPSGNGDLNSSLSDSHEIKKSKRKELVSIVAPIAGVAAAAFLLIPLYAYCFRRRKGGFKSPTSLVIHPRDPSDSDSAVKIVVANNTNGSISTLTGSGSGSRNSSGTGESHVIEAGNLRISVQVLRNVTKNFAPENELGRGGFGVVYKGELDDGTKIAVKRMEAGVITSKALDEFQSEIAVLSKVRHRHLVSLLGYSIEVTGKITTKADVFSFGVVLMELLTGLMALDEGRPEESQYLAAWFWRIKSDKKKLMAAIDQVLDVKEETFESISIIAELAGHCTAREPSQRPDMGHAVNVLAPLVEKWKPFDGDTEEYSGIDYSLPLNQMVKGWQEAEGKDMSYMDLEDSKSSIPARPTGFADSFTSADGR 833
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed2g2031 833 Pfam Protein tyrosine and serine/threonine kinase 600 663 IPR001245 GO:0004672|GO:0006468
Aed2g2031 833 ProSitePatterns Protein kinases ATP-binding region signature. 603 625 IPR017441 GO:0005524
Aed2g2031 833 MobiDBLite consensus disorder prediction 450 478 - -
Aed2g2031 833 SUPERFAMILY Protein kinase-like (PK-like) 584 765 IPR011009 -
Aed2g2031 833 Gene3D Phosphorylase Kinase; domain 1 561 666 - -
Aed2g2031 833 SUPERFAMILY L domain-like 323 435 - -
Aed2g2031 833 Gene3D Ribonuclease Inhibitor 18 318 IPR032675 -
Aed2g2031 833 PANTHER RECEPTOR PROTEIN KINASE TMK1-LIKE 665 833 - -
Aed2g2031 833 Gene3D Ribonuclease Inhibitor 322 443 IPR032675 -
Aed2g2031 833 PANTHER RECEPTOR PROTEIN KINASE TMK1-LIKE 3 664 - -
Aed2g2031 833 SUPERFAMILY L domain-like 17 299 - -
Aed2g2031 833 Pfam Leucine rich repeat N-terminal domain 324 360 IPR013210 -
Aed2g2031 833 Pfam Leucine rich repeat N-terminal domain 19 57 IPR013210 -
Aed2g2031 833 Pfam Leucine rich repeat 234 292 IPR001611 GO:0005515
Aed2g2031 833 Gene3D Transferase(Phosphotransferase) domain 1 667 769 - -
Aed2g2031 833 MobiDBLite consensus disorder prediction 808 833 - -
Aed2g2031 833 PANTHER OSJNBA0070M12.3 PROTEIN 665 833 - -
Aed2g2031 833 SMART serkin_6 597 767 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed2g2031 833 PANTHER OSJNBA0070M12.3 PROTEIN 3 664 - -
Aed2g2031 833 SMART LRR_typ_2 232 255 IPR003591 -
Aed2g2031 833 SMART LRR_typ_2 256 279 IPR003591 -
Aed2g2031 833 SMART LRR_typ_2 130 158 IPR003591 -
Aed2g2031 833 SMART LRR_typ_2 410 432 IPR003591 -
Aed2g2031 833 SMART LRR_typ_2 106 129 IPR003591 -
Aed2g2031 833 SMART LRR_typ_2 183 207 IPR003591 -
Aed2g2031 833 ProSiteProfiles Protein kinase domain profile. 597 833 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed2g2031 833 MobiDBLite consensus disorder prediction 449 482 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed2g2031 Aed-Chr2 24721992 24725779 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed2g2031 60 661 Receptor kinase-like Gene Family AT4G36180 28.222 9.20e-39 154
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-IX Aed2g2031 PK_Tyr_Ser-Thr 1.4e-08 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed2g2031 - - gmx:100305366 1012.68
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed2g2031 2 24721992 24725779 Aed2g2031 2 24721992 24725779 ECH
Aed2g2031 2 24721992 24725779 Aed8g0609 8 5213644 5217878 PCT