Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed2g2020 ATGGCTGGTAAGCACGGAAGAGGCTGCTGTTGCTGCCTATTCGGAATCTTGTGGAAGATTCTGGTAACACTCATTGTCCTCGTTGGCCTCGCAATCCTCATTTTCTGGTTGGTCGTTCAACCCCGCCCCTTCAAGTTTCATGTTACAGAAGCGGACCTGACCCAATTTGATTACAATAGCATCAACAACACCCTTAACTACAACATGGTACTCAACTTCACTGCACGCAACCCCAACAAGAAACTCAGCATCTACTACGACAAAGTAGAGGCATTGGCATACTACGAGGATGCCAGGTTCGCCAATGACGATGTCATAACACACATGAACTCTTTCCGACAGTACAAGAAGAGCAGCAGTCCCATGAGCGCCGTTTTCTCAGGGCAGAATAAGGTGTTGATGCTCAACAATGAACAAGTCTCAAAGTTCAACCAAGACAAGAGTGATGGGGTTTACGACATCTATGTGAGGCTCAACTTCAGGATCAGGCTCGGGGACGTGATATCCAATGATTACAAGCCCAAGGTCAAATGTCACCTCAAGGTTCCTTTCAGTAAAAATGCCACCTTTACTCTGTTTCAGACCACCAAGTGCGATGTTCAGGCTCGGGGACTCGATATCCCGTCACATGAAGCCCAACGTCAAATGCCACCTCACGGTTCCTTTCAGTAA 672 0.4747 MAGKHGRGCCCCLFGILWKILVTLIVLVGLAILIFWLVVQPRPFKFHVTEADLTQFDYNSINNTLNYNMVLNFTARNPNKKLSIYYDKVEALAYYEDARFANDDVITHMNSFRQYKKSSSPMSAVFSGQNKVLMLNNEQVSKFNQDKSDGVYDIYVRLNFRIRLGDVISNDYKPKVKCHLKVPFSKNATFTLFQTTKCDVQARGLDIPSHEAQRQMPPHGSFQ 223
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed2g2020 223 Pfam Late embryogenesis abundant protein 73 170 IPR004864 -
Aed2g2020 223 PANTHER LATE EMBRYOGENESIS ABUNDANT PROTEIN 4 200 - -
Aed2g2020 223 PANTHER OS05G0367900 PROTEIN 4 200 IPR044839 GO:0098542
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed2g2020 Aed-Chr2 24638162 24689785 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed2g2020 38 189 SNARE and Associated Proteins AT1G32270 38.217 1.24e-23 95.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed2g2020 - - gmx:100807701 347.821