Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed2g1986 ATGGAGACACAGAGTATGGATTTATCAAATCCTGCAGCCTTAGTCAATGCGGAGCTGTTGCACTTCTATGTTGGAAGGAGGGTACGGGTCTTGATGCAGGTTGTGCGATCTGACGGTGGAGTTGTCATTGGAAAATCAACAGATGAGAAACAGTTAGTTGTAAAAGGATCACCCCCACCCGCTCCGCTTACAACTTTTGTAGAAGTTTTTGGTGTTGTTAACAGTGACAAGTCAATTGGTGCTGAGATATGGACCAATTTTGGTGATGCCATTGATATGGAAATCTACAATAAGCTTTGTCAGCTTGCAAATGGAGAATTTAAACACTTGTTCCTGTGA 339 0.4248 METQSMDLSNPAALVNAELLHFYVGRRVRVLMQVVRSDGGVVIGKSTDEKQLVVKGSPPPAPLTTFVEVFGVVNSDKSIGAEIWTNFGDAIDMEIYNKLCQLANGEFKHLFL 112
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed2g1986 112 SUPERFAMILY Nucleic acid-binding proteins 10 111 IPR012340 -
Aed2g1986 112 Pfam Replication factor A protein 3 9 108 IPR013970 GO:0003677|GO:0005634|GO:0006260|GO:0006281|GO:0006310
Aed2g1986 112 CDD RPA3 11 104 - -
Aed2g1986 112 Gene3D - 8 112 IPR012340 -
Aed2g1986 112 PANTHER REPLICATION PROTEIN A 14 KDA SUBUNIT A-RELATED 6 112 - -
Aed2g1986 112 PANTHER REPLICATION PROTEIN A 14 KDA SUBUNIT A-RELATED 6 112 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed2g1986 Aed-Chr2 24353952 24355854 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed2g1986 6 112 Core DNA Replication Machinery Family AT4G18590 61.682 1.12e-48 149
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed2g1986 K10740 - gmx:100306641 201.83
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed2g1986 2 24353952 24355854 Aed2g1986 2 24353952 24355854 ECH