Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed2g1970 ATGGTGATTGAGGAGGGCGAGATGGAGATGGAGATGGAGATGAACGAGAACCATTGTTCTCTATTGTCGTCGTCATCATCGCTGGGAAGACAGTCATCGTCGATATACTCTCTGACACTGGACGAGTTCCAGAACAGCATATGCGATAGCGGCAAGAATTTCGGGTCCATGAATATGGACGAGTTCCTCACCAGCATCTGGACCGCTGAAGAGAACAACCAATCCATCATACATAATATTAATCACGTCCCTCCTCCTCCTCCTCTCTCCCAAACATTATTCCCAACAACAGATGACAACCCCAGCCTCCCTCGTCAACCCTCACTGTCCCTCCCTGCTCCTCTTTCTACCAAAACTGTCGACCAGGTTTGGTCCCAGATTCAGAAACAACAAAACAACAACAACAACAATGTACTTAATATTACCGAGTCTGCCTCTCGCCAACCCACTTTTAACGAGATGACGTTGGAGGATTTTTTGGTTAAGGCCGGGGTAGTCAGGGAACCACCATGTGCACCGCCGTCTCATTACGCAACAAATAACAACAACAACGTTGCAGCAATGGCTCCTTCTTTTGTTGCACCGGCTTCTGCAGCAGCTGGGACGACCACGTATCTTGGAAATTGTAAGAGGGATTGTTTTGGAGGGAGTGGGTATGGGCCTGGGCCTGTGAGCCCGGCTAATTCGTCTGATGGGATTGACATGGTGAGAGGTAGAAAGAGGATGGTGGATGGTATTGTTGTGGAAAAGGTGGTGGAGAGAAGACAGAGGAGGATGATCAAGAATAGAGAGTCTGCTGCCAGATCTAGAGCCAGAAAACAGGCTTACACTGTGGAATTAGAAGCAGAACTTAACCAATTAAAACAAGATAACGCCCAACTCAAACAGTCGCTGGCCCAGCTCCAGAGAAAAAGAAAGCAACAGAGTTTTGAGGAAGTGGACGTTAGAGTTCAAACCAAAGCTCAGAAAGCAAGAGAGAAGCTCAGAAAATTGAGAAGGAACATGAGTTGTTCTTTGTGA 1020 0.4735 MVIEEGEMEMEMEMNENHCSLLSSSSSLGRQSSSIYSLTLDEFQNSICDSGKNFGSMNMDEFLTSIWTAEENNQSIIHNINHVPPPPPLSQTLFPTTDDNPSLPRQPSLSLPAPLSTKTVDQVWSQIQKQQNNNNNNVLNITESASRQPTFNEMTLEDFLVKAGVVREPPCAPPSHYATNNNNNVAAMAPSFVAPASAAAGTTTYLGNCKRDCFGGSGYGPGPVSPANSSDGIDMVRGRKRMVDGIVVEKVVERRQRRMIKNRESAARSRARKQAYTVELEAELNQLKQDNAQLKQSLAQLQRKRKQQSFEEVDVRVQTKAQKAREKLRKLRRNMSCSL 339
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed2g1970 339 PANTHER CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED 24 176 IPR043452 GO:0003700|GO:0045893
Aed2g1970 339 SMART brlzneu 250 314 IPR004827 GO:0003700|GO:0006355
Aed2g1970 339 PANTHER ABA RESPONSE ELEMENT-BINDING FACTOR 24 176 IPR029803 GO:0003700|GO:0005634|GO:0009737|GO:0045893
Aed2g1970 339 Pfam bZIP transcription factor 254 306 IPR004827 GO:0003700|GO:0006355
Aed2g1970 339 Coils Coil 314 334 - -
Aed2g1970 339 CDD bZIP_plant_BZIP46 254 308 - -
Aed2g1970 339 Coils Coil 270 311 - -
Aed2g1970 339 MobiDBLite consensus disorder prediction 93 113 - -
Aed2g1970 339 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 252 304 IPR004827 GO:0003700|GO:0006355
Aed2g1970 339 SUPERFAMILY Leucine zipper domain 254 304 IPR046347 GO:0003700|GO:0006355
Aed2g1970 339 PANTHER CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED 220 338 IPR043452 GO:0003700|GO:0045893
Aed2g1970 339 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 257 272 IPR004827 GO:0003700|GO:0006355
Aed2g1970 339 Gene3D - 252 308 - -
Aed2g1970 339 PANTHER ABA RESPONSE ELEMENT-BINDING FACTOR 220 338 IPR029803 GO:0003700|GO:0005634|GO:0009737|GO:0045893
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed2g1970 Aed-Chr2 24258788 24266638 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed2g1970 26 308 bZIP Transcription Factor Family AT2G36270 43.005 7.52e-69 220
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Aed2g1970 bZIP_1 1.4e-11 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed2g1970 K14432 - gmx:100818567 331.257
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed2g1970 2 24258788 24266638 Aed2g1970 2 24258788 24266638 ECH
Aed2g1970 2 24258788 24266638 Aed8g0541 8 4665011 4670853 PCT