Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed2g1964 ATGGCCGAAGAACACCGATGCCAAGCTCCTGAAGGTCATAGACTCTGCGCCAACAACTGCGGTTTCTTCGGTAGCCCCGCCACCATGAATCTCTGTTCCAAATGTTACAGAGACATCCGTTTGAAGGAAGAAGAACAAGCCAAAACCAAATCCACAATCGAAACCGCTCTTTCTGCATCTTCCTCCTCCCCCATCGCCACCGCGACCGCAACCGCCGTCGTTGCCGTTGCCTCCGTCACGGATTTCTTGCCAGCGCTGGTTGAACCACTCCCTCAACCGCCGGTGCTGGCTTCTCCAGATGTAACCGCACCGGTTCAGGCGAACCGGTGCGGCGCGTGCAGGAAACGCGTGGGGTTGACCGGGTTCAAATGCAGGTGCGGAACCACGTTTTGTGGGACCCACAGGTACCCTGAGAAACACGCGTGTGACTTCGATTTCAAGGCGGTTGGGAGAGAGGAGATAGCACGTGCGAATCCTGTGATCAAAGGCGAGAAGCTACGGAGGATTTAA 510 0.5608 MAEEHRCQAPEGHRLCANNCGFFGSPATMNLCSKCYRDIRLKEEEQAKTKSTIETALSASSSSPIATATATAVVAVASVTDFLPALVEPLPQPPVLASPDVTAPVQANRCGACRKRVGLTGFKCRCGTTFCGTHRYPEKHACDFDFKAVGREEIARANPVIKGEKLRRI 169
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed2g1964 169 ProSiteProfiles Zinc finger A20-type profile. 10 44 IPR002653 GO:0003677|GO:0008270
Aed2g1964 169 PANTHER ZINC FINGER A20 AND AN1 DOMAIN-CONTAINING STRESS-ASSOCIATED PROTEIN 3 1 169 - -
Aed2g1964 169 Gene3D - 1 65 - -
Aed2g1964 169 ProSiteProfiles Zinc finger AN1-type profile. 104 150 IPR000058 GO:0008270
Aed2g1964 169 PANTHER AN1-TYPE ZINC FINGER PROTEIN 1 169 - -
Aed2g1964 169 SUPERFAMILY AN1-like Zinc finger 103 164 IPR035896 -
Aed2g1964 169 Pfam A20-like zinc finger 14 37 IPR002653 GO:0003677|GO:0008270
Aed2g1964 169 Gene3D - 90 165 IPR035896 -
Aed2g1964 169 Pfam AN1-like Zinc finger 110 146 IPR000058 GO:0008270
Aed2g1964 169 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 15 58 - -
Aed2g1964 169 SMART A20_3 13 37 IPR002653 GO:0003677|GO:0008270
Aed2g1964 169 SMART AN1_Zf_4 110 147 IPR000058 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed2g1964 Aed-Chr2 24223656 24224165 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed2g1964 1 169 C2H2 Transcription Factor Family AT3G52800 48.837 1.19e-51 161
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed2g1964 - - gmx:100527251 280.026
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed2g1964 2 24223656 24224165 Aed8g0529 8 4583622 4584128 PCT