Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed2g1962 ATGAACTCCCACAAGCAACTCTTTCCCCTCCTCTCTCTTTTCTTAGTTCTATATCTCTCAGAACAAACGGTGGTGCAAGCTGAAGCTAGCCCAACAAAATTGTTCGTTTTCGGAGACTCCTATGCTGACACAGGTAACATTCCCAAAAGTGTCTCAAATTCATGGAAGGACCCTTATGGCTTCACCTTTCCCGGCAAGCCCGCCGGTCGTTTCTCCGACGGGAGAGTCCTCACCGATTACATCGCAAAGTATTTGAAATTGAAATCGCCAATCCCCTACAGATTGAGGAAAGTGATCCCACAACATGTGAAATATGGGATGAACTTTGCGTTTGGGGGCACTGGTGTCTTTAACACGTTAGTTCTACTCCCAAACATGACAACCCAGATAGATTTCTTGGAGCAACTCATCAAAGACAAAGTGTACACTTCCTTAGATCTCACCAACTCAGTTGCCCTTCTCTCTGTCGCTGGAAATGACTACAGTCGTTACATTCAAACTAATGGCTCCCAGAGAGTAATGGTGGGATCTTTACAACCCCTTGGATGCCTACCGGAAGAAATATCACAAACCTCATTCCAACGTTGCAATGAAACCACAAACGCCTTTGTACTTCTCCACAACACCCTCTTGATGCAAGCAGTGGCCAAGTTGAACCAACAACAAGATGGTTCTTCTTCTTCCAATACCTTCCAAATCCTGAACCTCTTCGACAGTTTCATGTCGGTGTTGAACCACCCTTCGACCCACAACATCCGAAACAAGTTCACACCGTGCTGTGTTGGCGTGAACAGCAAGTACTCATGCGGGAGTGTGGACAAACACAATGTGAAGAAATATAAGGTCTGTGATGACCCCAAATCTGCGTTCTTTTGGGATCATGTGCACCCTACAGAGGCTGGATGGCATGCAATATATAACAAGTTGCGAACCATGAATGCCCTTCAACACATTCTTTACTAG 963 0.4559 MNSHKQLFPLLSLFLVLYLSEQTVVQAEASPTKLFVFGDSYADTGNIPKSVSNSWKDPYGFTFPGKPAGRFSDGRVLTDYIAKYLKLKSPIPYRLRKVIPQHVKYGMNFAFGGTGVFNTLVLLPNMTTQIDFLEQLIKDKVYTSLDLTNSVALLSVAGNDYSRYIQTNGSQRVMVGSLQPLGCLPEEISQTSFQRCNETTNAFVLLHNTLLMQAVAKLNQQQDGSSSSNTFQILNLFDSFMSVLNHPSTHNIRNKFTPCCVGVNSKYSCGSVDKHNVKKYKVCDDPKSAFFWDHVHPTEAGWHAIYNKLRTMNALQHILY 320
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed2g1962 320 PANTHER OSJNBB0059K02.9 PROTEIN 172 320 - -
Aed2g1962 320 PANTHER GDSL-LIKE LIPASE/ACYLHYDROLASE 172 320 - -
Aed2g1962 320 Gene3D SGNH hydrolase 167 317 IPR036514 -
Aed2g1962 320 Gene3D SGNH hydrolase 19 166 IPR036514 -
Aed2g1962 320 PANTHER OSJNBB0059K02.9 PROTEIN 1 171 - -
Aed2g1962 320 PANTHER GDSL-LIKE LIPASE/ACYLHYDROLASE 1 171 - -
Aed2g1962 320 SUPERFAMILY SGNH hydrolase 31 309 - -
Aed2g1962 320 Pfam GDSL-like Lipase/Acylhydrolase 169 308 IPR001087 GO:0016788
Aed2g1962 320 Pfam GDSL-like Lipase/Acylhydrolase 34 166 IPR001087 GO:0016788
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed2g1962 Aed-Chr2 24200382 24203435 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed2g1962 10 305 Pollen Coat Proteome AT1G75930 25.507 4.47e-21 90.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed2g1962 - - gmx:100788092 525.398