Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed2g1960 ATGAACAACGTGACCATGACGGATGCGGAATCGGAGAAGCGCTCTGCTTCCACATCTTTCTATTCATCATCTTCCTACTCCTCTTCCTCCTGCCACCGTTTCGATCGCCTCGTCGACACCGATGATATCGAGGCGGCTGAGACTCTCGCTCACCTCGCAATGCGCGACACTCACTCCGCCGATAATTGCTGCACCAAACCCGACACAACCCGAGTCATGCTCGAGTCACCGACTCTTCACTCGGATCTCTCTCTTGGGCCTGGGGGCCAAGCTGTTGCAAGTCAGCAACTAGATGAAAAAATATCCACCACATCTGTAGAAACAGAAATGATTCAGCAGGATGACTGTTCGAGACACATGAAGGTGGAGCAAGATACTGATTTATTACCTAACACAAGTTACTCTTTAGTTCGAAGCAGCAAGTCACGGAGAAATTTAACTGAGGAAGAAAAAGAAGCAAGGAGGATACGCCGGATATTGGCAAATAGAGAGTCAGCTAGACAGACAATTCGCCGTAGGCAGGCTCTGTGTGAGGAGTTAACCAGAAAAGCTGCCACTTTGGTGGTGGAGAATGAAAACCTAAAGAGGGAGAAAGAGTTGGCTTTGAAAGATTATCAGTCTTTGGAGACTACAAATAAGCACTTAAAGGCAGAAATAGCCAAGTCAATAAACACCAAAGTGGAGAAAACTCCTGTTCAGCCGGAGTCATCTGTGGCTGAGGTAACACCTTTGTCTGGTAACAGTCCATGGTTCCTTTATAACCATTTTCCAGTTCCACAGATGTATTGGCCTTCCATCGTACAGTCTTCTAATCCAGTTCATTTACAAAATACATCATTTAATTCCATCGGCATTCCATCTAATGCTAATGTTCCATGTTCTTCCGAGTCTGAATCATGTTCCAGGCAAAACAACCCCATAAATGATAATCGAACACAAAATCCATTTTACATATTTTCTTTGGATGAACCAGCACTTGGCTGTAATGGTCATGCTTCTGCTGTCAAACAAGAACATGAACTTTATATTGCAACTTCTTCACAAGAACAGTCCAGTTGTCAGGGAAAAAATCTAGTGGATGCAGTTGCTGCGGCAGAAGCAAGAAAGAGGAGAAAGGAACTAACAAAGCAGAAAACCATCCACAACCGCCAGTCTCGGATGCACTGTTGA 1170 0.4479 MNNVTMTDAESEKRSASTSFYSSSSYSSSSCHRFDRLVDTDDIEAAETLAHLAMRDTHSADNCCTKPDTTRVMLESPTLHSDLSLGPGGQAVASQQLDEKISTTSVETEMIQQDDCSRHMKVEQDTDLLPNTSYSLVRSSKSRRNLTEEEKEARRIRRILANRESARQTIRRRQALCEELTRKAATLVVENENLKREKELALKDYQSLETTNKHLKAEIAKSINTKVEKTPVQPESSVAEVTPLSGNSPWFLYNHFPVPQMYWPSIVQSSNPVHLQNTSFNSIGIPSNANVPCSSESESCSRQNNPINDNRTQNPFYIFSLDEPALGCNGHASAVKQEHELYIATSSQEQSSCQGKNLVDAVAAAEARKRRKELTKQKTIHNRQSRMHC 389
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed2g1960 389 MobiDBLite consensus disorder prediction 1 30 - -
Aed2g1960 389 Pfam bZIP transcription factor 150 212 IPR004827 GO:0003700|GO:0006355
Aed2g1960 389 SUPERFAMILY Leucine zipper domain 154 206 IPR046347 GO:0003700|GO:0006355
Aed2g1960 389 PANTHER G-BOX-BINDING FACTOR 3-RELATED 6 319 IPR044827 GO:0003700|GO:0006355|GO:0043565
Aed2g1960 389 PANTHER G-BOX-BINDING FACTOR 3-RELATED 347 384 IPR044827 GO:0003700|GO:0006355|GO:0043565
Aed2g1960 389 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 152 215 IPR004827 GO:0003700|GO:0006355
Aed2g1960 389 SMART brlzneu 150 214 IPR004827 GO:0003700|GO:0006355
Aed2g1960 389 CDD bZIP_plant_GBF1 155 206 IPR045314 GO:0003700|GO:0006355
Aed2g1960 389 Coils Coil 364 384 - -
Aed2g1960 389 Coils Coil 163 225 - -
Aed2g1960 389 PANTHER BASIC-LEUCINE ZIPPER (BZIP) TRANSCRIPTION FACTOR FAMILY PROTEIN 6 319 - -
Aed2g1960 389 PANTHER BASIC-LEUCINE ZIPPER (BZIP) TRANSCRIPTION FACTOR FAMILY PROTEIN 347 384 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed2g1960 130 318 bZIP Transcription Factor Family AT1G19490 43.590 4.87e-36 135
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Aed2g1960 bZIP_1 5.5e-09 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed2g1960 - - gmx:778152 504.212