Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed2g1957 ATGGGTTCATTCTCTGGCACTTGTGAAATAGTTGAAGCAAGGGAGGAGCTAAATACAAGGAAAGCTCCTGGGGTTTATCAGTCCAGTTCTGAGTGTAGCACGTCTGAGAAAAATCCGAAACTTTCGGTTCCAAAATCGGGATACAAGGATGATCTAGATGATGATATCAACAAGCTTTTTGAATCGATTGCTCTTAAATCTTCATCAAGGGATTTGAGCCTTTTCCAAGATGGTACAAGTCCTAGGCTGAAAAGTGCATTAAAAAAGCCAATTACAATGGGTGTTCCTCGGTCTCCAAGAGTTGGGACTTCTGAGCCCGTTAATTTGAAGCAAGCATTAAGAGACCTTTGTATATCTAAGGCATCGGAAATGGCTGCTATGAAACGATTGTCAAAGTCAACAACAGCTTCTCCAAGATTATCTGAAGTTGGGAAGATACAGACGTTGTACAATTCAGTTGTAGCTGAAAACAGTCGATCTGGGTCTTCCTTTGTTGAGAGGAAGGGGCGTCAAATTGAAATATCTCTAATGCCAGAAAAAGGCAAATCCCATTCCTTGGAGAAAACCTCTCAATCTTATCAAACTTCTCAAATTGCATCCTCGAGCCGAAACATTCATTCATCTCGGGAGATTTCTGTTGCAACTACTCAATATGATGCTGGGACTTCATCGGTACAAAGTGATTTGGCATGCTCATCAAGTAAAGTTGGGATTCAATCACAACGAGTGGTGCCTGTTGAAACAGAAGAACAAGCATCTGTGTCTTCTCCCTCTCTTTATAATACATTTGGAAGCAAATCAGAGGTGCCCAAAAATGCTTCTTCCCCTAAAAAGTTGGGAAATAAAGCATTTGTGTCAAATACTGGGAAGAAAGGTAGGTTGCAAACAGTATCTTCATCTACTTCTGTAAATGGCAACAAAGTTAACAAACTGCCACGCCATGCCCCCCGCACTGTTAAAGCGGTCATCAAGAACAAGAATCTGAGTAAGAAGAAACAAAAGGAGGATTCAGGTTCTGCTTTATGTGGTCCTACACCCAATGAAGTTAATAAGCCAGTTCCTGGTACACCTCGGCTAATTTGTGATAGATGTAGGTGTTCTTTGGAAAATACAAGTGAGGAAAAAAACCAAGATATTGTGGCATTGGACTGTACCAGTCCTGGAACTGGTTCAAATAAACCTGGTTTGGTGTCAAGTAGTGTTAATAAAAGCAAAACAGTTGGAAAAGTGAAGAACTCCAAGTTGAAGGAGCAACTTGAATTTTCACAAAGTTCAAAGAGTAGTCAAGGTGAGTACAGTAGTAGTACAAGTACCAGTGATGAGAGCAATGTAAGTGGTTCAAGTCGTAGCACTAGACCTCACATGTCAAAGGATGTCAGGTGGGCAGCCATACGACATGCTCAAATGCAGCATGGAGTCTTGGGCTTGAGACACTTCAATCTTTTAAAGAAACTTGGCTGTGGAGACATTGGGACTGTATATCTTGCAGAACTAATTGGCACTAGCTGCTTGTTCGCTATTAAGGTCATGGACAATGAATTTTTGGAAAGAAGAAAGAAGATGCCTAGGGCTCAAACTGAAAGAGAAATATTAAGGATCCTGGATCACCCTTTTCTTCCCACAATGTATGCACAATTTACATCAGATAATCTATCGTGTCTGGTCATGGAGTATTGTCCAGGTGGAGATCTTCACGTTCTACGGCAGAAGCAGCTTGGTAGATATTTCTCGGAGCAAGCAGCAAGGTTTTATGTTGCTGAAGTTCTCCTTGCTTTGGAGTACTTGCACATGCTTGGAGTTGTTTACCGTGATTTGAAACCCGAAAACATTCTTGTTCGGGAAGATGGCCACATTATGCTCACAGATTTTGATCTGTCCCTGAGGTGTGCTGTTAACCCAGTGCTTCTGAAATCATCTGCTGTTGTGGACCCTGCAAAAATTTCTGGTCTAAGTGCACAATCAAGTTGCATTGAGCCATTCTGCATTGAACCATCTTGTCAAGTTCCATGCTTCAGCCCAAGGTTGTTCCCCGCCGCCGCAAAAGCAAGGAAACTAAAAGTTGATCTTGCAGCCCAGGTGAGATCATTGCCACAGCTTGTGGCCGAGCCCACTGATGCAAGATCAAACTCATTTGTTGGTACACATGAATACTTGGCTCCTGAGATCATCAAAGAAGAGGGACATGGAGCTGCAGTTGACTGGTGGACATTTGGTGTTTTTCTCTATGAACTTTTGTATGGTAGAACACCCTTTAAAGGTTCTAACAATGAAGACACATTGGCCAACGTAGTGTTGCAGGGTCTTAGATTCCCTGAGCACCCAAATGTTAGTTTCCATGCAAAGGATCTGATTAGAGGGTTGTTGGTTAAAGAGCCTGAAAACCGTTTGGGTTCAGAGAAAGGTGCTGCTGAGATTAAACAGCACCCCTTCTTCGAGGGACTTAACTGGGCCTTGATTCGTTGTGCTGTGCCTCCAGAACTTCCAGACTTTTATGATTTTGGAATTTCAGACATGATGAACCCACAGGGCAAGGGTGTTAAGTACTTAGAGTGTAAAGTAGGAGAGCGTGTAGAATTCGAGTTGTTTTAA 2589 0.4241 MGSFSGTCEIVEAREELNTRKAPGVYQSSSECSTSEKNPKLSVPKSGYKDDLDDDINKLFESIALKSSSRDLSLFQDGTSPRLKSALKKPITMGVPRSPRVGTSEPVNLKQALRDLCISKASEMAAMKRLSKSTTASPRLSEVGKIQTLYNSVVAENSRSGSSFVERKGRQIEISLMPEKGKSHSLEKTSQSYQTSQIASSSRNIHSSREISVATTQYDAGTSSVQSDLACSSSKVGIQSQRVVPVETEEQASVSSPSLYNTFGSKSEVPKNASSPKKLGNKAFVSNTGKKGRLQTVSSSTSVNGNKVNKLPRHAPRTVKAVIKNKNLSKKKQKEDSGSALCGPTPNEVNKPVPGTPRLICDRCRCSLENTSEEKNQDIVALDCTSPGTGSNKPGLVSSSVNKSKTVGKVKNSKLKEQLEFSQSSKSSQGEYSSSTSTSDESNVSGSSRSTRPHMSKDVRWAAIRHAQMQHGVLGLRHFNLLKKLGCGDIGTVYLAELIGTSCLFAIKVMDNEFLERRKKMPRAQTEREILRILDHPFLPTMYAQFTSDNLSCLVMEYCPGGDLHVLRQKQLGRYFSEQAARFYVAEVLLALEYLHMLGVVYRDLKPENILVREDGHIMLTDFDLSLRCAVNPVLLKSSAVVDPAKISGLSAQSSCIEPFCIEPSCQVPCFSPRLFPAAAKARKLKVDLAAQVRSLPQLVAEPTDARSNSFVGTHEYLAPEIIKEEGHGAAVDWWTFGVFLYELLYGRTPFKGSNNEDTLANVVLQGLRFPEHPNVSFHAKDLIRGLLVKEPENRLGSEKGAAEIKQHPFFEGLNWALIRCAVPPELPDFYDFGISDMMNPQGKGVKYLECKVGERVEFELF 862
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed2g1957 862 PANTHER FLIPPASE KINASE 1-RELATED 1 862 - -
Aed2g1957 862 MobiDBLite consensus disorder prediction 327 356 - -
Aed2g1957 862 Pfam Protein kinase domain 708 811 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed2g1957 862 Pfam Protein kinase domain 480 628 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed2g1957 862 MobiDBLite consensus disorder prediction 263 310 - -
Aed2g1957 862 Gene3D Transferase(Phosphotransferase) domain 1 704 820 - -
Aed2g1957 862 Gene3D Phosphorylase Kinase; domain 1 477 558 - -
Aed2g1957 862 SMART serkin_6 479 811 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed2g1957 862 MobiDBLite consensus disorder prediction 417 452 - -
Aed2g1957 862 ProSiteProfiles Protein kinase domain profile. 479 811 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed2g1957 862 CDD STKc_phototropin_like 477 829 - -
Aed2g1957 862 ProSitePatterns Serine/Threonine protein kinases active-site signature. 600 612 IPR008271 GO:0004672|GO:0006468
Aed2g1957 862 Gene3D Transferase(Phosphotransferase) domain 1 559 627 - -
Aed2g1957 862 SUPERFAMILY Protein kinase-like (PK-like) 453 833 IPR011009 -
Aed2g1957 862 MobiDBLite consensus disorder prediction 263 308 - -
Aed2g1957 862 MobiDBLite consensus disorder prediction 386 456 - -
Aed2g1957 862 MobiDBLite consensus disorder prediction 19 50 - -
Aed2g1957 862 PANTHER PROTEIN KINASE SUPERFAMILY PROTEIN 1 862 - -
Aed2g1957 862 MobiDBLite consensus disorder prediction 386 408 - -
Aed2g1957 862 MobiDBLite consensus disorder prediction 22 41 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed2g1957 Aed-Chr2 24164691 24169106 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed2g1957 1 862 AGC Kinase Gene Family AT3G52890 52.687 0.0 835
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Aed2g1957 Pkinase 6.7e-36 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed2g1957 - K08286 gmx:100792120 1536.93