Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed2g1952 ATGGACTTTCATCTGAAGCAATGGAGAAACCAGGATGAGTCAGAGGAACAACATTCTACAAAGATGCCAAAACTTCTCCCTGAATCCCATCAACAATCACCTGCCTCTGCACTCCCTTTGTTTGTACCTGAACCCCACAGCAAAGTCAGCACCTTGTCAGATTCAACATTAGCCACTGCTACCACCACCACTAACAGATTATTTCCCAGGATGGGGAGCTACTTCAGCTTGTCACAGTGGCAGGAGCTTGAGTTGCAGGCTTTGATATTCAGGTACATGTTGGCTGGTGCTGCTGTTCCTCTTGAACTCCTTCAACCAATCAAGAAAAGCCTTCTTCACTCCCCTCATTATTTCCTCCATCACCCTCTCCAACATTACCAACCTGCTTTGTTGCAATCAGGGTATTGGGGGAGAGGAGCGATGGATCCGGAGCCAGGGCGGTGCCGGAGAACCGACGGCAAGAAGTGGCGGTGCTCGAGGGACGTGGTGGCCGGACAAAAGTACTGTGAGCGCCACATGCATCGTGGAAGAAACCGTTCAAGAAAGCCTGTGGAACTACCCACACCAACTAGTGCTAATAATAATTGTGGTGGTGCCTCATCTTCCATTTCTTCACCGCCCCTAGCTTCTGCTTCACTCAAATCTCCTTTTGATCTTCTTCACACTGAACGTTCCTCTGGCACCAAGAATGAAGACAACAAGAGGCTGTTTGAAAACGAAGATCATGTGGGTGGGGATGGAAGATCAGGTGGCCATATGCTGAGACATTTTTTCGATGATTGGCCACGATCACTGCAAGACTCTGACAACAACAACAACGTTGAAAACAATGGCAACTCGGCCACATGCCTCTCTATTTCAATGCCCGGAAATGCTTCTTCCTCGGATGTGTCGTTGAAATTGTCCACGGGCTATGGAGAGGACCCGGGCCCAAGAATTATCGAGAATGTGGGCCTCGAGGCGGAGCAACTCCAGTTGAATTGGGCCGGAGGATGGGCCTCATCTAATCAAGTGGCTTCAATGGGAGGACCACTTGCTGAGGCACTCAGATCGTCTACTACAACTTCGTCTCCCACTAGTGTTTTGCATCATCACTTGCACTTGCCTCGTGCTTCTGGATCCGAGACCAGCTTTATTAGCACCTGA 1146 0.4965 MDFHLKQWRNQDESEEQHSTKMPKLLPESHQQSPASALPLFVPEPHSKVSTLSDSTLATATTTTNRLFPRMGSYFSLSQWQELELQALIFRYMLAGAAVPLELLQPIKKSLLHSPHYFLHHPLQHYQPALLQSGYWGRGAMDPEPGRCRRTDGKKWRCSRDVVAGQKYCERHMHRGRNRSRKPVELPTPTSANNNCGGASSSISSPPLASASLKSPFDLLHTERSSGTKNEDNKRLFENEDHVGGDGRSGGHMLRHFFDDWPRSLQDSDNNNNVENNGNSATCLSISMPGNASSSDVSLKLSTGYGEDPGPRIIENVGLEAEQLQLNWAGGWASSNQVASMGGPLAEALRSSTTTSSPTSVLHHHLHLPRASGSETSFIST 381
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed2g1952 381 PANTHER - 8 381 IPR031137 GO:0005634|GO:0006351|GO:0032502
Aed2g1952 381 PANTHER GROWTH-REGULATING FACTOR 3 8 381 - -
Aed2g1952 381 MobiDBLite consensus disorder prediction 223 250 - -
Aed2g1952 381 Pfam QLQ 75 107 IPR014978 GO:0005524|GO:0005634|GO:0006355
Aed2g1952 381 Pfam WRC 143 185 IPR014977 -
Aed2g1952 381 MobiDBLite consensus disorder prediction 172 208 - -
Aed2g1952 381 SMART QLQ_2 73 109 IPR014978 GO:0005524|GO:0005634|GO:0006355
Aed2g1952 381 MobiDBLite consensus disorder prediction 1 23 - -
Aed2g1952 381 ProSiteProfiles WRC domain profile. 142 186 IPR014977 -
Aed2g1952 381 MobiDBLite consensus disorder prediction 184 208 - -
Aed2g1952 381 ProSiteProfiles QLQ domain profile. 74 109 IPR014978 GO:0005524|GO:0005634|GO:0006355
Aed2g1952 381 MobiDBLite consensus disorder prediction 224 250 - -
Aed2g1952 381 MobiDBLite consensus disorder prediction 1 29 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed2g1952 Aed-Chr2 24096243 24099806 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed2g1952 1 363 GRF Transcription Factor Family AT3G52910 51.938 1.57e-98 296
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRF Aed2g1952 WRC 2.4e-22 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed2g1952 - - gmx:100814842 572.007
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed2g1952 2 24096243 24099806 Aed2g1952 2 24096243 24099806 ECH