Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed2g1942 ATGGAAATGCCCGGCAGAAGATCCAGCAACTACTCCCTCCTCAGTCAAACTCCTGACGACAACTTAACGGCGCCGTTGTTCGGTTCATCCTCCGGCGACGGTAAAAACAACAACAACAGCAAGTTTGAGAGAGTCTCTGATTGGGACTCCGGCATCGATCACCGGCAGGGGAATCGGATCGGCAATTTGCACTCCTCGACGTTCGGGATGCAGCGCCAGTCCAGCGAGAGCAGTTTCGGCGAGAGCTCGCTCTCCGGCGAGTTTTACGCACCGACTCTTTCCACCGTCGCGGCCAACGAGATCGATGGATTCAGAGGCAAGTTTCCCGGAAACTCGGCGCTGAGGAGCGCGGGGTCCTCCGGCAAGAGCTGGGCGCAGCAGACGGAGGAGAGTTACCAGTTACAGCTGGCATTGGCTCTTCGCCTTGCCTCCGAGGCCACGTGTGCTGATGATCCTAATTTTCTGGATCCCGTGCCCGATGAATCCGCGTTGAGGTCTTCCTCGTCTTTTTCCGCAGAGGCAGTGTCGCATAGGTTTTGGTATCAACTACTCCCATTTGTTGTGGCACTAACAGTTGAAACATTGCCTTCTGGAATTCTGGCATTCACTCTTAATCTGTACCAAGTGAATGGCTGCCTATTATACTTCGACAAAATTCCTGATGGCTTTTATCTTATTCAAGGGATGGATCCCTATGTATGGACTGTGTGCACTGATCTTCAGGAAAATGGCCGAATTCCTTCACTTGAGGCACTAAAATCTATAGTTCCTTCGTCTGATTCTCCACTTGAAGTAGTTTTGGTGGATAGACGTAATGATCCTAACTTAAAAGGACTGCAAAACAAAGCACATGACATTTCTTGTCAGTGCATAGCAACAACAGATGTTGTAGACCAACTTGCAAAGCTGGTTTGCAATTATATGGGGGGTTCAGCTTCTGTATGGGAAGATGATCTTTTTCCTACATGGAGGGAGTGCATTAGTTATCTAAGAGATTGCTTAGGATCTGTTGTTGTACCAATTGGCAGTCTATCTGTTGGACTTTGCAGGCATCGTGCTGTATTATTCAAAGTACTAGCTGACACCATTGATTTACCGTGTCGAATTGGCAAGGGCTGTAAATATTGTTCAAGAGATGATGCCTCCTCGTGTCTTGTTCGATTTGGGCTTGACAGGGAATACATGGTTGATCTAATTGGGAAGCCAGGTTGCTTATGCGAGCCTGATTCCTTGCTCAATGGTCCATCTTCCATCTCATTTTCTTCACCCTTGTGCTTTCCAAGACTTAAACCAGCTGAACCTACCATTGATTTCAGGTCACTGGCCAAACAATATTTCTCGGATTGTATGTCTGCTGAGCTTGTCTTTGATAGTAGTTCTGCAGTACCTGTTATTGATGAAGATTTTGGATTCTCCATTCCAGAACAGTATGAAAGGCAGTACAGGGACAGGAACCCTGGGCCAATTCCAAATGATAACAACAGAAGTTCTCTTGTTCCTCTGCATCCACAGCATTATCGTTCAAGTGCACATGATCGAGGCTCTGAATCATTTAAATCAGGCCATCCTCAGAATGTTGTAGAGCCAGCAATGACAAGCCAGGATTCATTGCCTTTAAAGCATAACCGTGCTGGTCATAGAGATACACAGACCCGACTACTGATTCCTAGCAAACCAACTAGAGAGTTTTCCCTTGATATGGAGGATTTGGACATACCGTGGGCTGATCTTGTTTTAAAAGGGAGAATAGGATCAGCACTGCAGGAGGTTGCTGTGAAAATTCTGATGGAACAAGACTTCAAAGGTGAACGCTTCAAGGAATTCCTGAGGGAGGTTGCAATAATGAAAGGCTTACGGCATCCAAACATCGTTTTACTTATGGGTGCAGTCACTAAGCCTCCTAATTTATCAATTGTCACAGAATATTTGTCAAGGGGTAGCTTGTATAGGCTGTTGCATAAACCTGGTGCCACAGAGATGTTGGATGAGAGACGTAGGCTTAGTATGGCTTATGATGTGGTTTGTGATTTTGGGCTTTCCCGACTAAAGGCAAATACATTTCTCTCATCCAAGTCAGCTGCTGGGACTCCTGAGTGGATGGCTCCAGAAGTTCTTCGCGATGAGCCATCCAATGAGAAGTCAGATGTTTACAGCTTTGGTGTCATCTTGTGGGAGCTCGCAACATTGCAACAGCCTTGGAGTAATTTGAATCCACCACAGGTTGTGGCGGCTGTTGGCTTTAAGGGAAAAAGACTTGAGATACCACGTGATTTAAATCCTCAATTAGCCTCAATAATTGAGGCTTGTTGGGCCAACGAACCTTGGAAACGCCCTTCTTTTTCAAGTATTATGGACTCTTTGAAAGTATTGCTCAAACCCCCTATGCCTCAACCTGGTCGTCCAAGCATGTCATTACTTACCTGA 2424 0.4625 MEMPGRRSSNYSLLSQTPDDNLTAPLFGSSSGDGKNNNNSKFERVSDWDSGIDHRQGNRIGNLHSSTFGMQRQSSESSFGESSLSGEFYAPTLSTVAANEIDGFRGKFPGNSALRSAGSSGKSWAQQTEESYQLQLALALRLASEATCADDPNFLDPVPDESALRSSSSFSAEAVSHRFWYQLLPFVVALTVETLPSGILAFTLNLYQVNGCLLYFDKIPDGFYLIQGMDPYVWTVCTDLQENGRIPSLEALKSIVPSSDSPLEVVLVDRRNDPNLKGLQNKAHDISCQCIATTDVVDQLAKLVCNYMGGSASVWEDDLFPTWRECISYLRDCLGSVVVPIGSLSVGLCRHRAVLFKVLADTIDLPCRIGKGCKYCSRDDASSCLVRFGLDREYMVDLIGKPGCLCEPDSLLNGPSSISFSSPLCFPRLKPAEPTIDFRSLAKQYFSDCMSAELVFDSSSAVPVIDEDFGFSIPEQYERQYRDRNPGPIPNDNNRSSLVPLHPQHYRSSAHDRGSESFKSGHPQNVVEPAMTSQDSLPLKHNRAGHRDTQTRLLIPSKPTREFSLDMEDLDIPWADLVLKGRIGSALQEVAVKILMEQDFKGERFKEFLREVAIMKGLRHPNIVLLMGAVTKPPNLSIVTEYLSRGSLYRLLHKPGATEMLDERRRLSMAYDVVCDFGLSRLKANTFLSSKSAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPWSNLNPPQVVAAVGFKGKRLEIPRDLNPQLASIIEACWANEPWKRPSFSSIMDSLKVLLKPPMPQPGRPSMSLLT 807
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed2g1942 807 CDD STKc_MAP3K-like 588 787 - -
Aed2g1942 807 Pfam Protein tyrosine and serine/threonine kinase 586 673 IPR001245 GO:0004672|GO:0006468
Aed2g1942 807 Pfam Protein tyrosine and serine/threonine kinase 674 787 IPR001245 GO:0004672|GO:0006468
Aed2g1942 807 MobiDBLite consensus disorder prediction 40 54 - -
Aed2g1942 807 SUPERFAMILY Protein kinase-like (PK-like) 579 798 IPR011009 -
Aed2g1942 807 MobiDBLite consensus disorder prediction 519 539 - -
Aed2g1942 807 MobiDBLite consensus disorder prediction 481 547 - -
Aed2g1942 807 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 112 673 - -
Aed2g1942 807 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 674 796 - -
Aed2g1942 807 MobiDBLite consensus disorder prediction 1 81 - -
Aed2g1942 807 MobiDBLite consensus disorder prediction 487 503 - -
Aed2g1942 807 MobiDBLite consensus disorder prediction 59 81 - -
Aed2g1942 807 ProSiteProfiles Protein kinase domain profile. 572 791 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed2g1942 807 MobiDBLite consensus disorder prediction 8 39 - -
Aed2g1942 807 PANTHER MAP KINASE KINASE KINASE-LIKE PROTEIN 112 673 - -
Aed2g1942 807 PANTHER MAP KINASE KINASE KINASE-LIKE PROTEIN 674 796 - -
Aed2g1942 807 Gene3D Transferase(Phosphotransferase) domain 1 672 796 - -
Aed2g1942 807 Pfam Ethylene-responsive protein kinase Le-CTR1 207 406 - -
Aed2g1942 807 Gene3D Phosphorylase Kinase; domain 1 571 644 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed2g1942 Aed-Chr2 23985228 24000709 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed2g1942 1 800 MAP Kinase Kinase Kinase AT5G03730 57.464 0.0 842
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL_CTR1-DRK-2 Aed2g1942 EDR1 1.1e-74 CL0125
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed2g1942 K14510 - gmx:100810555 1332.78
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed2g1942 2 23985228 24000709 Aed2g1942 2 23985228 24000709 ECH
Aed2g1942 2 23985228 24000709 Aed8g0507 8 4336107 4345307 PCT