Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed2g1940 ATGGAGTTTTGGGGTAACACTATTTCTTTCCAGTTCTCACTTCATTTCGTTAGCATCGCCATTTCTCTTCTGTTTCGTGTTGAGGTGAAAAGTGGAGAATCTCTCAAGGTTGATCCAGGAGATGACAAGATTATCCACCTTTCAATTGCATGTCTGGGGGATGTCACTAAGGATAAAGGAGGTGCACCAGTAGCCCTGTATGTGAAGTTTGGTAACCAGAAGCTTGTACTTGGAACGCTTTCTTCTGATAAATTTCCTCAGATATCTTATGATTTGATATTTGAGAAGGAATTTGAGCTATCCCATAATTGGAAAAATGGGAATTTTGATGAAGATATTCCAGTTAGTGCTGCCAATGGGATACCTGAGATTGAGGCAAATAATGGTGTCAAACCTGATGCAAATGTAGCTAAATCAAAGAAGACAGGAGATCCAAGGAAGAATGAGAAGGCTAAGAAAAAGGATGCAAATGGCGAAGATGAAGATTCATCTGAATCTGATTCTGATGTAGATACAAGTGAAGAAGATAAGATTGAAGCAAGCAATAAGAGGATTATTGACTCTTCAAAGAAAACACCTGTTCCTGTGAAGAAGGCAAAATTTGTTACTCCTCAAAAGACTGATAGCAAGAATGTTCTCCATGTTGCAACTCCTCACCCTTCTAAGCAGGCTGGTAAAGCACCTGCAAATAGCAAGCAGCCTTCTCCAAAGTCAGGCGGAGATTACAGCTGCAGTCCTTGCAACAGGTCATTTAAGACAGAAGAGGGCTTAGGTTGTCATAATAAGGCCAAGCACAGTGCCAAGTGA 807 0.4077 MEFWGNTISFQFSLHFVSIAISLLFRVEVKSGESLKVDPGDDKIIHLSIACLGDVTKDKGGAPVALYVKFGNQKLVLGTLSSDKFPQISYDLIFEKEFELSHNWKNGNFDEDIPVSAANGIPEIEANNGVKPDANVAKSKKTGDPRKNEKAKKKDANGEDEDSSESDSDVDTSEEDKIEASNKRIIDSSKKTPVPVKKAKFVTPQKTDSKNVLHVATPHPSKQAGKAPANSKQPSPKSGGDYSCSPCNRSFKTEEGLGCHNKAKHSAK 268
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed2g1940 268 PANTHER HISTONE DEACETYLASE HDT3-LIKE ISOFORM X1 26 174 - -
Aed2g1940 268 PANTHER 32 KDA HEAT SHOCK PROTEIN-RELATED 26 174 - -
Aed2g1940 268 MobiDBLite consensus disorder prediction 124 247 - -
Aed2g1940 268 MobiDBLite consensus disorder prediction 224 247 - -
Aed2g1940 268 MobiDBLite consensus disorder prediction 175 194 - -
Aed2g1940 268 ProSiteProfiles Zinc finger C2H2 type domain profile. 242 268 IPR013087 -
Aed2g1940 268 MobiDBLite consensus disorder prediction 137 160 - -
Aed2g1940 268 Pfam Nucleoplasmin-like domain 25 103 IPR041232 -
Aed2g1940 268 PANTHER 32 KDA HEAT SHOCK PROTEIN-RELATED 136 264 - -
Aed2g1940 268 PANTHER HISTONE DEACETYLASE HDT3-LIKE ISOFORM X1 136 264 - -
Aed2g1940 268 ProSitePatterns Zinc finger C2H2 type domain signature. 244 265 IPR013087 -
Aed2g1940 268 Gene3D Nucleoplasmin core domain 19 111 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed2g1940 Aed-Chr2 23941191 23945926 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed2g1940 1 267 C2H2 Transcription Factor Family AT5G03740 36.306 1.10e-47 158
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed2g1940 - - gmx:100812152 352.058
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed2g1940 2 23941191 23945926 Aed2g1940 2 23941191 23945926 ECH