Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed2g1931 ATGCACTTACCCGTGTCTAGCGTTTCTACATATGCACCGATGTTAGAGGTCAGAGGTCAGCCGAGGTGCGTCTCAACATTCGACAAGCAAGAGTGGTGGGTGGTGACGGAATCTTCGGCGTTTATATATGCTGCACTCACAATTCACAGAAATCAAATCATGGCCATGGCCTGGACTTCACTCTTTCTCCTACTCCTGTCTCTCCCTCTCTTCCTCTTTTTCTTCTGCCGCCGCTGCAAAACCTCAACCTCAAACCGCCGTCTTCCGCCGGGACCAGCGGGATGGCCAATATTCGGAAACATGTTCCAGCTGGGAGACATGCCTCACCGCACCCTGAGCGATCTAAGGGACAAATACGGCCCCGTGGTGTGGCTCAAAATCGGCGCGATGAACACCATGGCGGTTCTCTCCGCAGAAGCCGCCAGCGTCTTCTTCAAGCACCACGATCACACCTTCGCTGACCGAAACGTAAACGAAACCATGCGCGTCCACAACTACGACAAATCATCCCTGGCCCTAGCCCCATACGGCCCCTACTGGCGCCTCATGCGACGCCTCGTCACAGTCGACATGCTCGTCGCCAAACGCATAAACGACACCGCGTCCATCCGCCGGAAATGCGTGAACGACATGATAAACTGGGTGGCGAAGGAAGCAGGCAAGTCGGAGCAGCAGGGTCGCGGGGTCCACGTGGCGTGGTTTGTATTTCTGATGACGTTTAACCTGTTCGGGAACCTAATGGTGTCGCGGGATTTGTTCGAGCCGGAGTCGGAGGAGGGGTCGGAGTTATTTAGCGCGATGATGGGGCTGATGGAGTGGACGGGGCACCCTAACGTGACGGACCTGTTCCCATGCCTGAGGTGGCTGGACCCGCAGGGGCTCAGGAGAAAGATGGACAGGGACATGGGCAAGGCTCTTGAAATCGCTTCCAGGTTCGTGAAACAGCGTTTGGATCAACAGCACCTGCACTCTCGTCACAACAACTCCTCAAGGGACTTCTTGGATGTCCTCATTGACTTTCAAACCACCAACACTCAAGAGGCACTCAACGTTTCAGATAAAGATCTCAACGTTTTCATATTGGAAATGTTCATGGCTGGGTCAGAAACAACGAGCAGCACAATCGAGTGGGCCCTGACGGAGCTTCTGTGCAACAGGGAGTGTTATTTGAAGGTGAAAAATGAGCTTAGTACGGTGGTTGGGTTCGGAAGAGAAGTTGAGGAGAGTGACATAGAGAAGCTTCCATACCTGCAAGCCGTGGTTAAGGAAACACTTCGGTTACATCCTCCAATTCCGTTGCTTGTCCCACGCAAGGCCACGGAGGACACAGAGTTCATGGGATACCACATACCCAAAGACACCCAGGTTTTCGTGAACGCATGGGCGATTGGGAGAGACCCCAGCGCGTGGGACCAACCGTTAGCCTTCAACCCCGAACGGTTTTGTGATGATTGCAACAACGCTGTTGATTACAAGGGGCGCCACTTTGAGTTTATTCCGTTCGGGGCTGGAAGAAGAATGTGTGCGGGTGTGCCGTTGGCGCATAGGGTGCTTAACTTGGTGCTGGGTTCGTTGCTTCACCGCTTCGATTGGGAACTTGACTGCCACGTCACGCCGTCCACCATGGACATGAGGGACAAGCTCGGAATAACAATGCGAAAATTGGAACCCTTGCTTGTGGTGCCTAAATTCATTTCCTATGATGCCGAGTCATGA 1716 0.5355 MHLPVSSVSTYAPMLEVRGQPRCVSTFDKQEWWVVTESSAFIYAALTIHRNQIMAMAWTSLFLLLLSLPLFLFFFCRRCKTSTSNRRLPPGPAGWPIFGNMFQLGDMPHRTLSDLRDKYGPVVWLKIGAMNTMAVLSAEAASVFFKHHDHTFADRNVNETMRVHNYDKSSLALAPYGPYWRLMRRLVTVDMLVAKRINDTASIRRKCVNDMINWVAKEAGKSEQQGRGVHVAWFVFLMTFNLFGNLMVSRDLFEPESEEGSELFSAMMGLMEWTGHPNVTDLFPCLRWLDPQGLRRKMDRDMGKALEIASRFVKQRLDQQHLHSRHNNSSRDFLDVLIDFQTTNTQEALNVSDKDLNVFILEMFMAGSETTSSTIEWALTELLCNRECYLKVKNELSTVVGFGREVEESDIEKLPYLQAVVKETLRLHPPIPLLVPRKATEDTEFMGYHIPKDTQVFVNAWAIGRDPSAWDQPLAFNPERFCDDCNNAVDYKGRHFEFIPFGAGRRMCAGVPLAHRVLNLVLGSLLHRFDWELDCHVTPSTMDMRDKLGITMRKLEPLLVVPKFISYDAES 571
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed2g1931 571 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 501 510 IPR017972 GO:0005506|GO:0016705
Aed2g1931 571 PRINTS E-class P450 group I signature 355 372 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed2g1931 571 PRINTS E-class P450 group I signature 459 483 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed2g1931 571 PRINTS E-class P450 group I signature 498 508 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed2g1931 571 PRINTS E-class P450 group I signature 116 135 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed2g1931 571 PRINTS E-class P450 group I signature 375 401 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed2g1931 571 PRINTS E-class P450 group I signature 418 436 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed2g1931 571 PRINTS E-class P450 group I signature 508 531 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed2g1931 571 Gene3D Cytochrome P450 75 561 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed2g1931 571 PANTHER CYTOCHROME P450, FAMILY 76, SUBFAMILY C, POLYPEPTIDE 5-RELATED 59 564 - -
Aed2g1931 571 PRINTS P450 superfamily signature 366 383 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed2g1931 571 PRINTS P450 superfamily signature 508 519 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed2g1931 571 PRINTS P450 superfamily signature 419 430 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed2g1931 571 PRINTS P450 superfamily signature 499 508 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed2g1931 571 Pfam Cytochrome P450 89 553 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed2g1931 571 PANTHER CYTOCHROME P450 FAMILY PROTEIN 59 564 - -
Aed2g1931 571 SUPERFAMILY Cytochrome P450 89 562 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed2g1931 Aed-Chr2 23864427 23866705 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed2g1931 48 562 Cytochrome P450 AT3G52970 42.857 1.74e-144 426
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed2g1931 K22983 - gmx:100785241 871.692
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed2g1931 2 23864427 23866705 Aed2g1931 2 23864427 23866705 ECH