Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed2g1929 ATGAAAAAGGTTTGTTTTTGTCCCATAATCCTGGCACTAGCCTTGGCCTTGTGCTGCATCCTCTGTTTTGCAGCAGAGCAAAATGATACACTCGCACTCACCGAATTCCGTCTCCAAACCGACACCCACGGCAACCTCCTCACAAACTGGACCGGTGCCGAAGCCTGCTCTGCCGCATGGCACGGCGTCGAGTGCTCCCCAAACGGCAGAGTGGTGGGCCTGACCCTCCCTGCACTCAATCTCCGCGGCCCAATAGACGCTCTCTCCACACTAACCTACCTCCGCTTCCTCGACCTCCACGAAAACCGCTTAAACGGCACCGTTTCGCCTCTCTTAAACTGCACAAGCTTGGAACTTCTCTACCTCTCCCGCAACGACTTTTCCGGCGAGATTCCGGCGGAGATATCCTCCCTCCGGCTCCTCCTCCGCCTGGATATCTCCGACAACAACATCCGCGGCCCAATCCCTACCCAACTCAAAAAACTAAGTCACCTCCTCACGCTGCGGTTACAGAACAACGCTCTCTCTGGCCACGTCCCCGACTTTTCCGCTTCCCTCCTCAACCTCACCGAACTCAACGTCACCAACAACGAACTCCGCGGCCACGTCCCCAATTCCATGCTCACTAAATTCGGCAATGCAAGCTTCATCGGTAACCACGCTCTCTGTGGGTCCACCCCGTTACCCAAATGCTCCGAAACAGAGCCTGACACTGAGACCACGATAACCGTTCCCGCAAAACCGAGCTCGTTCCCACAAACAAGTACCGTCACCGTTCCCGACGCTCCCAGAAAGAAAGGGTTGAGCGCCGGCGTCATTGTGGCGATCGTGGTGGCGGTTTGCGTGGCGGCGCTGGTGGCGTTCTCGTTCATTGTGGCGCATTGTTGCGCCAGAGGCTCCACCTCTGGTTCGGTGGTGGGGAGCGAGAGTGCGAAGAGGAAGAGTGGGAGTAGTAGTGGGAGCGAGAAGAAGGTGTATGGAAATAACGGTGGAAATTTCGATAGAGACAGTGATGGGACGAACACTGAGACGGAAAGGAGCAAGCTTGTGTTTTTCGACAGGAGGAACCAGTTTGAGTTGGAGGATCTGCTTCGAGCTTCGGCGGAGATGCTCGGAAAAGGAAGCTTGGGAACGGTTTACAGAGCGGTGCTGGACGATGGCTGCACCGTTGCTGTGAAGAGATTGAAAGACACTAACCCCTGCGAGAGGAACGAGTTTGAACAGTACATGGACGTTGTAGGGAAGCTCAAACACCCCAACATTGTTAGACTCAGAGCTTATTATTACGCTAAGGAAGAAAAGCTTCTCGTCTATGATTATCTCCCCAACGGAAGCTTGCATGCTCTTCTTCATGGGAAGCGTGGAGCAGGAAGGATTCCGTTGGATTGGACGACGAGAATAAGCTTGGTGTTAGGTGCGGGTAGAGGGTTGGCGAGGATTCATGCGGAGTACAACGCGTCGAAGATACCTCACGGGAACGTGAAAGCTTCGAACGTGGTTCTGGACAAGAACGGCGTCGCTTTGATCTCTGACTTCGGGTTATCGCTGCTGTTGAACCCGGTTCACGCGATTGCGAGGTTGGGTGGGTACAGAGCGCCGGAGCAGGTTGAGGTGAAGAAGCTCTCGCAGGAGGCTGACGTGTACGGTTTCGGGGTGCTGCTGTTGGAGGTTCTGACGGGGAGGGCTCCGAACTCGACGGCGGCGGCAGCGCAGGATGTGGGTGATGATCTTCCGAAGTGGGTGAAGTCGGTGGTGAAGGAGGAGTGGACCTCGGAGGTGTTTGATTCGGAGCTGCTGAGGTACAAGAACATTGAGGATGAGCTGGTGGCGATGTTGCACGTGGGACTCGCGTGCGTGGCGGCGCATCCCGACAAGAGGCCGAGTATGTTGGAGGTTGTTAAGATGATTGAGGATATCAGAGTTGAACAGTCACAGTCTCCTCTGGGAGAGGATTATGACGAGGCTCGCTCGCGCACTTCGCTTTCGCCTTCGCTCGCCACCACCGAAGACAACCTCTCTTAG 2022 0.5539 MKKVCFCPIILALALALCCILCFAAEQNDTLALTEFRLQTDTHGNLLTNWTGAEACSAAWHGVECSPNGRVVGLTLPALNLRGPIDALSTLTYLRFLDLHENRLNGTVSPLLNCTSLELLYLSRNDFSGEIPAEISSLRLLLRLDISDNNIRGPIPTQLKKLSHLLTLRLQNNALSGHVPDFSASLLNLTELNVTNNELRGHVPNSMLTKFGNASFIGNHALCGSTPLPKCSETEPDTETTITVPAKPSSFPQTSTVTVPDAPRKKGLSAGVIVAIVVAVCVAALVAFSFIVAHCCARGSTSGSVVGSESAKRKSGSSSGSEKKVYGNNGGNFDRDSDGTNTETERSKLVFFDRRNQFELEDLLRASAEMLGKGSLGTVYRAVLDDGCTVAVKRLKDTNPCERNEFEQYMDVVGKLKHPNIVRLRAYYYAKEEKLLVYDYLPNGSLHALLHGKRGAGRIPLDWTTRISLVLGAGRGLARIHAEYNASKIPHGNVKASNVVLDKNGVALISDFGLSLLLNPVHAIARLGGYRAPEQVEVKKLSQEADVYGFGVLLLEVLTGRAPNSTAAAAQDVGDDLPKWVKSVVKEEWTSEVFDSELLRYKNIEDELVAMLHVGLACVAAHPDKRPSMLEVVKMIEDIRVEQSQSPLGEDYDEARSRTSLSPSLATTEDNLS 673
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed2g1929 673 MobiDBLite consensus disorder prediction 644 673 - -
Aed2g1929 673 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 1 663 - -
Aed2g1929 673 ProSiteProfiles Protein kinase domain profile. 365 641 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed2g1929 673 Pfam Protein kinase domain 369 634 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed2g1929 673 Gene3D Ribonuclease Inhibitor 26 109 IPR032675 -
Aed2g1929 673 Gene3D Ribonuclease Inhibitor 110 233 IPR032675 -
Aed2g1929 673 MobiDBLite consensus disorder prediction 301 326 - -
Aed2g1929 673 MobiDBLite consensus disorder prediction 300 342 - -
Aed2g1929 673 MobiDBLite consensus disorder prediction 658 673 - -
Aed2g1929 673 SUPERFAMILY L domain-like 28 208 - -
Aed2g1929 673 SUPERFAMILY Protein kinase-like (PK-like) 369 636 IPR011009 -
Aed2g1929 673 CDD STKc_IRAK 371 639 - -
Aed2g1929 673 Gene3D Phosphorylase Kinase; domain 1 335 440 - -
Aed2g1929 673 PANTHER LRR RECEPTOR-LIKE KINASE 1 663 - -
Aed2g1929 673 Pfam Leucine rich repeat N-terminal domain 27 66 IPR013210 -
Aed2g1929 673 Gene3D Transferase(Phosphotransferase) domain 1 441 659 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed2g1929 Aed-Chr2 23854988 23857434 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed2g1929 27 669 Receptor kinase-like Gene Family AT2G36570 62.387 0.0 814
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Aed2g1929 Pkinase 8.5e-34 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed2g1929 - - gmx:100808402 1127.46
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed2g1929 2 23854988 23857434 Aed2g1929 2 23854988 23857434 ECH
Aed2g1929 2 23854988 23857434 Aed8g0499 8 4232471 4234616 PCT