Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed2g1906 ATGGGATTCAACAGAACCCTCTTTTGGCTTTCTGGCTTGATCATTTTTCTCTTTTCTATCATATTTGTTCTTTATACCACGCCACATGCACCTTCCACCACCATTATTAGTCCTCAAGATAGTTTCAGTTTCCAGCTTGGTGAATTTAGTAAGATTATAAAGCTTAGTGGCGCTCAAGACTTTGTGTCTCTGATAACAAGTATAGCTAGGAGGAGACATCATAAGGAAAAATGTGATGGGTCCAAATGGGATTCCAAGCTCATTCAAGACTATAATGTGAGTCTTGTTCTCACGGTTGGCTTAAAGGGCTGTGCTAACTTCAGTAGCGTGCAGAAAGCCGTTGATTCTGCTCCTGAGTCTAGTTATGACACTACCCTTATCATAATCGATTCTGGCACATACAGGGAGAAGGTAGTGGTGCAGGCCAACAAAACAAACTTGATAGTACAAGGTCAAGGGTATTTGAATACAATCATAGAATGGAATGACACCGCTAATTCAACCGGCGGTACTTCCTATAGCTACTCGTTTGGCATCTTTGCTTCTAAGTTCACTGCTTATAACATCAGCTTTAAGAACACGGCTCCTCCACCGTCACCAGGGGTGGCTGGGGCACAAGCAGTGGCACTGAGGATTACCGGTGATCAAGGTGCTTTCTATGGATGTGGGTTTTATGGAGCGCAGGACACACTCAATGATGATGCTGGAAGACATTATTTTAAACAATGCTTCATCCAAGGATCCATTGATTTCATTTTTGGAAATGCTAAATCACTTTATGAGGAGTGTACCATAAACTGTGTAGCAAAAGAAGAGAAGGATGAGATTAGCGGGTCGATAACCGCTCAAGGGAGGCAATCGATGAATGAGGAAAGTGGATTTTCGTTTGTGAATTGCAGCATTGATGGAAGTGGGAGAGTGTGGCTTGGAAGAGCTTGGGGACCCTATGCCACTGTTGTCTTCTCAACAACTTTCATGTCTGATGTCATTGCTCCTGATGGATGGAACGATTGGAGAGACCCCTCTCGAGACCAGAGCGTCTTCTTTGGAGAGTACCGTTGTCTTGGACCTGGAGCAAATTATACATCCAGAGTCCCTTATGCGAAGCAACTCAGAGATTACGAAGCAAACTCCTACACCAGTGTTTCCTACATTGATGGAAATGATTGGCTTCTTGATCATTTTCAAAGCTATGTTAACCCTTCTTATATCTAA 1215 0.4313 MGFNRTLFWLSGLIIFLFSIIFVLYTTPHAPSTTIISPQDSFSFQLGEFSKIIKLSGAQDFVSLITSIARRRHHKEKCDGSKWDSKLIQDYNVSLVLTVGLKGCANFSSVQKAVDSAPESSYDTTLIIIDSGTYREKVVVQANKTNLIVQGQGYLNTIIEWNDTANSTGGTSYSYSFGIFASKFTAYNISFKNTAPPPSPGVAGAQAVALRITGDQGAFYGCGFYGAQDTLNDDAGRHYFKQCFIQGSIDFIFGNAKSLYEECTINCVAKEEKDEISGSITAQGRQSMNEESGFSFVNCSIDGSGRVWLGRAWGPYATVVFSTTFMSDVIAPDGWNDWRDPSRDQSVFFGEYRCLGPGANYTSRVPYAKQLRDYEANSYTSVSYIDGNDWLLDHFQSYVNPSYI 404
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed2g1906 404 Gene3D - 91 399 IPR012334 -
Aed2g1906 404 SUPERFAMILY Pectin lyase-like 94 391 IPR011050 -
Aed2g1906 404 PANTHER PECTINESTERASE 14-RELATED 11 397 - -
Aed2g1906 404 Pfam Pectinesterase 98 388 IPR000070 GO:0030599|GO:0042545
Aed2g1906 404 ProSitePatterns Pectinesterase signature 2. 245 254 IPR033131 -
Aed2g1906 404 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 11 397 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed2g1906 Aed-Chr2 23701641 23704075 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed2g1906 90 391 Carbohydrate Esterase AT1G05310 54.754 1.29e-118 348
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed2g1906 - - gmx:100802034 726.857
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed2g1906 2 23701641 23704075 Aed8g0640 8 5558538 5561052 PCT